RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
ITGA5-213ENST00000553071 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
ITGA5-213ENST00000553071 PRO0628Q9UI54 55 aa6.2□□□□□ -1.42
ITGA5-213ENST00000553071 MT1GP13640 62 aa6.17□□□□□ -1.42
ITGA5-213ENST00000553071 SPRR2DP22532 72 aa6.17□□□□□ -1.42
ITGA5-213ENST00000553071 LCE5AQ5TCM9 118 aa6.16□□□□□ -1.42
ITGA5-213ENST00000553071 MT1LQ93083 61 aa6.14□□□□□ -1.43
ITGA5-213ENST00000553071 KRTAP19-4Q3LI73 84 aa6.11□□□□□ -1.43
ITGA5-213ENST00000553071 KRTAP2-3P0C7H8 128 aa6.09□□□□□ -1.43
ITGA5-213ENST00000553071 KRTAP20-1Q3LI63 56 aa6.09□□□□□ -1.43
ITGA5-213ENST00000553071 KRTAP2-4Q9BYR9 128 aa6.09□□□□□ -1.43
ITGA5-213ENST00000553071 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
ITGA5-213ENST00000553071 MT1MQ8N339 61 aa5.99□□□□□ -1.45
ITGA5-213ENST00000553071 LCE3BQ5TA77 95 aa5.96□□□□□ -1.46
ITGA5-213ENST00000553071 KRTAP2-2Q9BYT5 123 aa5.93□□□□□ -1.46
ITGA5-213ENST00000553071 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
ITGA5-213ENST00000553071 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
ITGA5-213ENST00000553071 DSTQ03001 7570 aaKnown RBP5.8□□□□□ -1.48
ITGA5-213ENST00000553071 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
ITGA5-213ENST00000553071 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
ITGA5-213ENST00000553071 PRAC1Q96KF2 57 aa5.78□□□□□ -1.48
ITGA5-213ENST00000553071 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
ITGA5-213ENST00000553071 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
ITGA5-213ENST00000553071 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
ITGA5-213ENST00000553071 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
ITGA5-213ENST00000553071 KRTAP5-4Q6L8H1 288 aa5.46□□□□□ -1.54
ITGA5-213ENST00000553071 KRTAP5-5Q701N2 237 aaPredicted RBP5.44□□□□□ -1.54
ITGA5-213ENST00000553071 KRTAP9-6A8MVA2 160 aa5.37□□□□□ -1.55
ITGA5-213ENST00000553071 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
ITGA5-213ENST00000553071 MT4P47944 62 aa5.32□□□□□ -1.56
ITGA5-213ENST00000553071 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
ITGA5-213ENST00000553071 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
ITGA5-213ENST00000553071 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
ITGA5-213ENST00000553071 MT1AP04731 61 aa5.25□□□□□ -1.57
ITGA5-213ENST00000553071 GPR98Q8WXG9 6306 aa5.24□□□□□ -1.57
ITGA5-213ENST00000553071 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
ITGA5-213ENST00000553071 HMCN1Q96RW7 5635 aa5.19□□□□□ -1.58
ITGA5-213ENST00000553071 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
ITGA5-213ENST00000553071 KRTAP20-2Q3LI61 65 aa5.11□□□□□ -1.59
ITGA5-213ENST00000553071 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
ITGA5-213ENST00000553071 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
ITGA5-213ENST00000553071 LUZP6Q538Z0 58 aa4.99□□□□□ -1.61
ITGA5-213ENST00000553071 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
ITGA5-213ENST00000553071 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
ITGA5-213ENST00000553071 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
ITGA5-213ENST00000553071 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
ITGA5-213ENST00000553071 MT3P25713 68 aa4.83□□□□□ -1.64
ITGA5-213ENST00000553071 KRTAP5-10Q6L8G5 202 aa4.76□□□□□ -1.65
ITGA5-213ENST00000553071 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
ITGA5-213ENST00000553071 KRTAP5-7Q6L8G8 165 aa4.56□□□□□ -1.68
ITGA5-213ENST00000553071 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
ITGA5-213ENST00000553071 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
ITGA5-213ENST00000553071 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
ITGA5-213ENST00000553071 H3BS24 57 aa4.35□□□□□ -1.71
ITGA5-213ENST00000553071 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
ITGA5-213ENST00000553071 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
ITGA5-213ENST00000553071 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
ITGA5-213ENST00000553071 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
ITGA5-213ENST00000553071 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
ITGA5-213ENST00000553071 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
ITGA5-213ENST00000553071 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
ITGA5-213ENST00000553071 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
ITGA5-213ENST00000553071 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
ITGA5-213ENST00000553071 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
ITGA5-213ENST00000553071 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
ITGA5-213ENST00000553071 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
ITGA5-213ENST00000553071 INE1O15225 51 aa3.7□□□□□ -1.82
ITGA5-213ENST00000553071 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
ITGA5-213ENST00000553071 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
ITGA5-213ENST00000553071 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
ITGA5-213ENST00000553071 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
ITGA5-213ENST00000553071 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
ITGA5-213ENST00000553071 PRM1P04553 51 aa3.32□□□□□ -1.88
ITGA5-213ENST00000553071 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
ITGA5-213ENST00000553071 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
ITGA5-213ENST00000553071 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
ITGA5-213ENST00000553071 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
ITGA5-213ENST00000553071 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 109.2 ms