RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 TNP1P09430 55 aa3.63□□□□□ -1.83
PFDN5-218ENST00000552742 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
PFDN5-218ENST00000552742 KRTAP2-1Q9BYU5 128 aa3.62□□□□□ -1.83
PFDN5-218ENST00000552742 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
PFDN5-218ENST00000552742 LCE3BQ5TA77 95 aa3.59□□□□□ -1.83
PFDN5-218ENST00000552742 K7ERS5 55 aa3.58□□□□□ -1.84
PFDN5-218ENST00000552742 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
PFDN5-218ENST00000552742 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
PFDN5-218ENST00000552742 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
PFDN5-218ENST00000552742 MT1GP13640 62 aa3.52□□□□□ -1.85
PFDN5-218ENST00000552742 H3BS24 57 aa3.51□□□□□ -1.85
PFDN5-218ENST00000552742 MT1LQ93083 61 aa3.5□□□□□ -1.85
PFDN5-218ENST00000552742 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
PFDN5-218ENST00000552742 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
PFDN5-218ENST00000552742 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
PFDN5-218ENST00000552742 MT1MQ8N339 61 aa3.46□□□□□ -1.86
PFDN5-218ENST00000552742 ROMO1P60602 79 aa3.42□□□□□ -1.86
PFDN5-218ENST00000552742 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
PFDN5-218ENST00000552742 LOC100996750A0A140TA64 210 aa3.4□□□□□ -1.87
PFDN5-218ENST00000552742 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.87
PFDN5-218ENST00000552742 KRTAP4-7Q9BYR0 210 aa3.37□□□□□ -1.87
PFDN5-218ENST00000552742 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
PFDN5-218ENST00000552742 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
PFDN5-218ENST00000552742 PRAC1Q96KF2 57 aa3.33□□□□□ -1.88
PFDN5-218ENST00000552742 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
PFDN5-218ENST00000552742 KRTAP15-1Q3LI76 137 aa3.26□□□□□ -1.89
PFDN5-218ENST00000552742 LCE4AQ5TA78 99 aa3.26□□□□□ -1.89
PFDN5-218ENST00000552742 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
PFDN5-218ENST00000552742 MT4P47944 62 aa3.24□□□□□ -1.89
PFDN5-218ENST00000552742 KRTAP19-4Q3LI73 84 aa3.23□□□□□ -1.89
PFDN5-218ENST00000552742 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
PFDN5-218ENST00000552742 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
PFDN5-218ENST00000552742 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
PFDN5-218ENST00000552742 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
PFDN5-218ENST00000552742 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
PFDN5-218ENST00000552742 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
PFDN5-218ENST00000552742 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
PFDN5-218ENST00000552742 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
PFDN5-218ENST00000552742 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
PFDN5-218ENST00000552742 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
PFDN5-218ENST00000552742 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
PFDN5-218ENST00000552742 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
PFDN5-218ENST00000552742 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
PFDN5-218ENST00000552742 MT1AP04731 61 aa2.97□□□□□ -1.93
PFDN5-218ENST00000552742 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
PFDN5-218ENST00000552742 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
PFDN5-218ENST00000552742 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
PFDN5-218ENST00000552742 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
PFDN5-218ENST00000552742 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
PFDN5-218ENST00000552742 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
PFDN5-218ENST00000552742 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
PFDN5-218ENST00000552742 NDUFAF8A1L188 74 aa2.77□□□□□ -1.97
PFDN5-218ENST00000552742 KRTAP4-11Q9BYQ6 195 aa2.76□□□□□ -1.97
PFDN5-218ENST00000552742 MT3P25713 68 aa2.72□□□□□ -1.97
PFDN5-218ENST00000552742 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
PFDN5-218ENST00000552742 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
PFDN5-218ENST00000552742 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
PFDN5-218ENST00000552742 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
PFDN5-218ENST00000552742 A0A0A0MQY5 61 aa2.61□□□□□ -1.99
PFDN5-218ENST00000552742 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
PFDN5-218ENST00000552742 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
PFDN5-218ENST00000552742 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
PFDN5-218ENST00000552742 INE1O15225 51 aa2.47□□□□□ -2.01
PFDN5-218ENST00000552742 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
PFDN5-218ENST00000552742 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
PFDN5-218ENST00000552742 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
PFDN5-218ENST00000552742 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
PFDN5-218ENST00000552742 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
PFDN5-218ENST00000552742 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
PFDN5-218ENST00000552742 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
PFDN5-218ENST00000552742 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
PFDN5-218ENST00000552742 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
PFDN5-218ENST00000552742 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
PFDN5-218ENST00000552742 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
PFDN5-218ENST00000552742 PRM1P04553 51 aa1.73□□□□□ -2.13
PFDN5-218ENST00000552742 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
PFDN5-218ENST00000552742 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
PFDN5-218ENST00000552742 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 72 ms