RNA–Protein interactions for RNA: ENST00000552351.5

CHPT1-210, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-210ENST00000552351 LCE5AQ5TCM9 118 aa9.81□□□□□ -0.84
CHPT1-210ENST00000552351 MT1GP13640 62 aa9.68□□□□□ -0.86
CHPT1-210ENST00000552351 KRTAP2-2Q9BYT5 123 aa9.66□□□□□ -0.86
CHPT1-210ENST00000552351 KRTAP2-1Q9BYU5 128 aa9.66□□□□□ -0.86
CHPT1-210ENST00000552351 LCE3BQ5TA77 95 aa9.66□□□□□ -0.86
CHPT1-210ENST00000552351 KRTAP12-3P60328 96 aa9.62□□□□□ -0.87
CHPT1-210ENST00000552351 PP632Q6XCG6 107 aa9.62□□□□□ -0.87
CHPT1-210ENST00000552351 MT1LQ93083 61 aa9.62□□□□□ -0.87
CHPT1-210ENST00000552351 KRTAP23-1A1A580 65 aa9.61□□□□□ -0.87
CHPT1-210ENST00000552351 ROMO1P60602 79 aa9.59□□□□□ -0.87
CHPT1-210ENST00000552351 MT1MQ8N339 61 aa9.48□□□□□ -0.89
CHPT1-210ENST00000552351 DSTQ03001 7570 aaKnown RBP9.37□□□□□ -0.91
CHPT1-210ENST00000552351 KRTAP19-4Q3LI73 84 aa9.25□□□□□ -0.93
CHPT1-210ENST00000552351 BRK1Q8WUW1 75 aa9.25□□□□□ -0.93
CHPT1-210ENST00000552351 KRTAP4-3Q9BYR4 195 aa9.16□□□□□ -0.94
CHPT1-210ENST00000552351 KRTAP15-1Q3LI76 137 aa9.15□□□□□ -0.94
CHPT1-210ENST00000552351 KRTAP4-7Q9BYR0 210 aa9.11□□□□□ -0.95
CHPT1-210ENST00000552351 LCE3CQ5T5A8 94 aa8.9□□□□□ -0.98
CHPT1-210ENST00000552351 LCE4AQ5TA78 99 aa8.89□□□□□ -0.99
CHPT1-210ENST00000552351 KRTAP5-4Q6L8H1 288 aa8.8□□□□□ -1
CHPT1-210ENST00000552351 KRTAP4-9Q9BYQ8 210 aa8.8□□□□□ -1
CHPT1-210ENST00000552351 PMAIP1Q13794 54 aa8.75□□□□□ -1.01
CHPT1-210ENST00000552351 LCE1DQ5T752 114 aa8.7□□□□□ -1.02
CHPT1-210ENST00000552351 KRTAP5-5Q701N2 237 aaPredicted RBP8.68□□□□□ -1.02
CHPT1-210ENST00000552351 MT4P47944 62 aa8.64□□□□□ -1.03
CHPT1-210ENST00000552351 LOC100996750A0A140TA64 210 aa8.61□□□□□ -1.03
CHPT1-210ENST00000552351 HMCN1Q96RW7 5635 aa8.56□□□□□ -1.04
CHPT1-210ENST00000552351 PRO0628Q9UI54 55 aa8.49□□□□□ -1.05
CHPT1-210ENST00000552351 KRTAP4-6Q9BYQ5 205 aa8.45□□□□□ -1.06
CHPT1-210ENST00000552351 KRTAP12-4P60329 112 aa8.35□□□□□ -1.07
CHPT1-210ENST00000552351 KRTAP9-6A8MVA2 160 aa8.34□□□□□ -1.07
CHPT1-210ENST00000552351 SPRR5A0A1B0GTR4 108 aa8.32□□□□□ -1.08
CHPT1-210ENST00000552351 KRTAP20-2Q3LI61 65 aa8.24□□□□□ -1.09
CHPT1-210ENST00000552351 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
CHPT1-210ENST00000552351 MT1AP04731 61 aa8.22□□□□□ -1.09
CHPT1-210ENST00000552351 SYNE1Q8NF91 8797 aaKnown RBP8.19□□□□□ -1.1
CHPT1-210ENST00000552351 KRTAP6-1Q3LI64 71 aa8.1□□□□□ -1.11
CHPT1-210ENST00000552351 GPR98Q8WXG9 6306 aa8.08□□□□□ -1.12
CHPT1-210ENST00000552351 AHNAK2Q8IVF2 5795 aa8.03□□□□□ -1.12
CHPT1-210ENST00000552351 KTN1-AS1Q86SY8 53 aa8.03□□□□□ -1.12
CHPT1-210ENST00000552351 KRTAP5-3Q6L8H2 238 aa7.99□□□□□ -1.13
CHPT1-210ENST00000552351 KRTAP9-4Q9BYQ2 154 aa7.88□□□□□ -1.15
CHPT1-210ENST00000552351 KRTAP5-10Q6L8G5 202 aa7.86□□□□□ -1.15
CHPT1-210ENST00000552351 KRTAP5-2Q701N4 177 aa7.79□□□□□ -1.16
CHPT1-210ENST00000552351 KRTAP6-2Q3LI66 62 aa7.66□□□□□ -1.18
CHPT1-210ENST00000552351 SVIPQ8NHG7 77 aa7.58□□□□□ -1.2
CHPT1-210ENST00000552351 MT3P25713 68 aa7.52□□□□□ -1.21
CHPT1-210ENST00000552351 KRTAP5-7Q6L8G8 165 aa7.51□□□□□ -1.21
CHPT1-210ENST00000552351 KRTAP4-11Q9BYQ6 195 aa7.42□□□□□ -1.22
CHPT1-210ENST00000552351 KRTAP5-8O75690 187 aa7.16□□□□□ -1.26
CHPT1-210ENST00000552351 OBSCNQ5VST9 7968 aa7.14□□□□□ -1.27
CHPT1-210ENST00000552351 LUZP6Q538Z0 58 aa7□□□□□ -1.29
CHPT1-210ENST00000552351 KRTAP5-1Q6L8H4 278 aa6.88□□□□□ -1.31
CHPT1-210ENST00000552351 LCE1EQ5T753 118 aa6.82□□□□□ -1.32
CHPT1-210ENST00000552351 H3BS24 57 aa6.81□□□□□ -1.32
CHPT1-210ENST00000552351 KRTAP9-9Q9BYP9 154 aa6.71□□□□□ -1.33
CHPT1-210ENST00000552351 MUC5ACP98088 5654 aa6.69□□□□□ -1.34
CHPT1-210ENST00000552351 MUC5BQ9HC84 5762 aaPredicted RBP6.56□□□□□ -1.36
CHPT1-210ENST00000552351 LCE3DQ9BYE3 92 aa6.52□□□□□ -1.37
CHPT1-210ENST00000552351 AHNAKQ09666 5890 aaKnown RBP6.46□□□□□ -1.38
CHPT1-210ENST00000552351 KRTAP4-2Q9BYR5 136 aa6.35□□□□□ -1.39
CHPT1-210ENST00000552351 LCE1CQ5T751 118 aa6.32□□□□□ -1.4
CHPT1-210ENST00000552351 LCE1BQ5T7P3 118 aa6.32□□□□□ -1.4
CHPT1-210ENST00000552351 KRTAP4-12Q9BQ66 201 aa6.27□□□□□ -1.41
CHPT1-210ENST00000552351 LCE3EQ5T5B0 92 aa6.21□□□□□ -1.42
CHPT1-210ENST00000552351 NDUFAF8A1L188 74 aa5.96□□□□□ -1.46
CHPT1-210ENST00000552351 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.83□□□□□ -1.48
CHPT1-210ENST00000552351 KRTAP5-11Q6L8G4 156 aa5.68□□□□□ -1.5
CHPT1-210ENST00000552351 LCE1FQ5T754 118 aa5.45□□□□□ -1.54
CHPT1-210ENST00000552351 KRTAP21-2Q3LI59 83 aa5.36□□□□□ -1.55
CHPT1-210ENST00000552351 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
CHPT1-210ENST00000552351 INE1O15225 51 aa4.95□□□□□ -1.62
CHPT1-210ENST00000552351 PRM1P04553 51 aa4.9□□□□□ -1.63
CHPT1-210ENST00000552351 PHGR1C9JFL3 82 aa4.88□□□□□ -1.63
CHPT1-210ENST00000552351 KRTAP4-4Q9BYR3 166 aa4.75□□□□□ -1.65
CHPT1-210ENST00000552351 MUC19Q7Z5P9 8384 aa4.36□□□□□ -1.71
CHPT1-210ENST00000552351 KRTAP21-1Q3LI58 79 aa3.47□□□□□ -1.85
CHPT1-210ENST00000552351 MUC16Q8WXI7 14507 aa3.15□□□□□ -1.91
Retrieved 78 of 20,778 RNA–protein pairs in 66.9 ms