RNA–Protein interactions for RNA: ENST00000552125.1

TUBA1C-208, Transcript of tubulin alpha 1c, humanhuman

TSL 4

Gene TUBA1C, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-208ENST00000552125 MT1GP13640 62 aa3.94□□□□□ -1.78
TUBA1C-208ENST00000552125 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
TUBA1C-208ENST00000552125 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
TUBA1C-208ENST00000552125 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
TUBA1C-208ENST00000552125 MT1LQ93083 61 aa3.84□□□□□ -1.79
TUBA1C-208ENST00000552125 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
TUBA1C-208ENST00000552125 MT1MQ8N339 61 aa3.83□□□□□ -1.8
TUBA1C-208ENST00000552125 PRO0628Q9UI54 55 aa3.83□□□□□ -1.8
TUBA1C-208ENST00000552125 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
TUBA1C-208ENST00000552125 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
TUBA1C-208ENST00000552125 TNP1P09430 55 aa3.8□□□□□ -1.8
TUBA1C-208ENST00000552125 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
TUBA1C-208ENST00000552125 PMAIP1Q13794 54 aa3.77□□□□□ -1.81
TUBA1C-208ENST00000552125 KRTAP5-4Q6L8H1 288 aa3.77□□□□□ -1.81
TUBA1C-208ENST00000552125 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
TUBA1C-208ENST00000552125 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
TUBA1C-208ENST00000552125 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
TUBA1C-208ENST00000552125 ROMO1P60602 79 aa3.73□□□□□ -1.81
TUBA1C-208ENST00000552125 MT4P47944 62 aa3.67□□□□□ -1.82
TUBA1C-208ENST00000552125 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
TUBA1C-208ENST00000552125 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
TUBA1C-208ENST00000552125 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
TUBA1C-208ENST00000552125 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
TUBA1C-208ENST00000552125 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
TUBA1C-208ENST00000552125 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
TUBA1C-208ENST00000552125 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
TUBA1C-208ENST00000552125 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
TUBA1C-208ENST00000552125 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
TUBA1C-208ENST00000552125 KRTAP4-7Q9BYR0 210 aa3.55□□□□□ -1.84
TUBA1C-208ENST00000552125 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
TUBA1C-208ENST00000552125 KRTAP23-1A1A580 65 aa3.53□□□□□ -1.84
TUBA1C-208ENST00000552125 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
TUBA1C-208ENST00000552125 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
TUBA1C-208ENST00000552125 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
TUBA1C-208ENST00000552125 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
TUBA1C-208ENST00000552125 KRTAP12-4P60329 112 aa3.47□□□□□ -1.85
TUBA1C-208ENST00000552125 SVIPQ8NHG7 77 aa3.43□□□□□ -1.86
TUBA1C-208ENST00000552125 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.87
TUBA1C-208ENST00000552125 LOC100996750A0A140TA64 210 aa3.37□□□□□ -1.87
TUBA1C-208ENST00000552125 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
TUBA1C-208ENST00000552125 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
TUBA1C-208ENST00000552125 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
TUBA1C-208ENST00000552125 MT1AP04731 61 aa3.28□□□□□ -1.88
TUBA1C-208ENST00000552125 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
TUBA1C-208ENST00000552125 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
TUBA1C-208ENST00000552125 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
TUBA1C-208ENST00000552125 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
TUBA1C-208ENST00000552125 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
TUBA1C-208ENST00000552125 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
TUBA1C-208ENST00000552125 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
TUBA1C-208ENST00000552125 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
TUBA1C-208ENST00000552125 MT3P25713 68 aa3□□□□□ -1.93
TUBA1C-208ENST00000552125 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
TUBA1C-208ENST00000552125 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
TUBA1C-208ENST00000552125 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
TUBA1C-208ENST00000552125 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
TUBA1C-208ENST00000552125 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
TUBA1C-208ENST00000552125 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
TUBA1C-208ENST00000552125 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
TUBA1C-208ENST00000552125 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
TUBA1C-208ENST00000552125 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
TUBA1C-208ENST00000552125 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
TUBA1C-208ENST00000552125 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
TUBA1C-208ENST00000552125 A0A0A0MQY5 61 aa2.47□□□□□ -2.01
TUBA1C-208ENST00000552125 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
TUBA1C-208ENST00000552125 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
TUBA1C-208ENST00000552125 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
TUBA1C-208ENST00000552125 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
TUBA1C-208ENST00000552125 INE1O15225 51 aa2.31□□□□□ -2.04
TUBA1C-208ENST00000552125 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
TUBA1C-208ENST00000552125 H3BS24 57 aa2.23□□□□□ -2.05
TUBA1C-208ENST00000552125 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
TUBA1C-208ENST00000552125 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
TUBA1C-208ENST00000552125 PRM1P04553 51 aa1.92□□□□□ -2.1
TUBA1C-208ENST00000552125 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
TUBA1C-208ENST00000552125 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
TUBA1C-208ENST00000552125 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
TUBA1C-208ENST00000552125 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms