RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 KRTAP4-9Q9BYQ8 210 aa6.6□□□□□ -1.35
CDK4-208ENST00000551706 TNP1P09430 55 aa6.55□□□□□ -1.36
CDK4-208ENST00000551706 PMAIP1Q13794 54 aa6.55□□□□□ -1.36
CDK4-208ENST00000551706 C10orf95Q9H7T3 257 aa6.55□□□□□ -1.36
CDK4-208ENST00000551706 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
CDK4-208ENST00000551706 MT1EP04732 61 aa6.42□□□□□ -1.38
CDK4-208ENST00000551706 ROMO1P60602 79 aa6.42□□□□□ -1.38
CDK4-208ENST00000551706 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
CDK4-208ENST00000551706 LCE3AQ5TA76 89 aa6.37□□□□□ -1.39
CDK4-208ENST00000551706 KTN1-AS1Q86SY8 53 aa6.37□□□□□ -1.39
CDK4-208ENST00000551706 HMCN1Q96RW7 5635 aa6.36□□□□□ -1.39
CDK4-208ENST00000551706 LCE1DQ5T752 114 aa6.35□□□□□ -1.39
CDK4-208ENST00000551706 KRTAP19-3Q7Z4W3 81 aa6.33□□□□□ -1.4
CDK4-208ENST00000551706 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
CDK4-208ENST00000551706 AHNAK2Q8IVF2 5795 aa6.3□□□□□ -1.4
CDK4-208ENST00000551706 LCE5AQ5TCM9 118 aa6.3□□□□□ -1.4
CDK4-208ENST00000551706 KRTAP5-10Q6L8G5 202 aa6.27□□□□□ -1.41
CDK4-208ENST00000551706 MT1GP13640 62 aa6.22□□□□□ -1.41
CDK4-208ENST00000551706 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
CDK4-208ENST00000551706 MT4P47944 62 aa6.19□□□□□ -1.42
CDK4-208ENST00000551706 MT1LQ93083 61 aa6.17□□□□□ -1.42
CDK4-208ENST00000551706 KRTAP12-3P60328 96 aa6.16□□□□□ -1.42
CDK4-208ENST00000551706 LCE4AQ5TA78 99 aa6.14□□□□□ -1.43
CDK4-208ENST00000551706 KRTAP5-7Q6L8G8 165 aa6.13□□□□□ -1.43
CDK4-208ENST00000551706 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
CDK4-208ENST00000551706 MT1MQ8N339 61 aa6.09□□□□□ -1.43
CDK4-208ENST00000551706 PRAC1Q96KF2 57 aa6.06□□□□□ -1.44
CDK4-208ENST00000551706 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
CDK4-208ENST00000551706 KRTAP5-3Q6L8H2 238 aa5.95□□□□□ -1.46
CDK4-208ENST00000551706 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
CDK4-208ENST00000551706 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
CDK4-208ENST00000551706 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
CDK4-208ENST00000551706 KRTAP5-4Q6L8H1 288 aa5.88□□□□□ -1.47
CDK4-208ENST00000551706 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
CDK4-208ENST00000551706 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.47
CDK4-208ENST00000551706 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
CDK4-208ENST00000551706 KRTAP20-2Q3LI61 65 aa5.61□□□□□ -1.51
CDK4-208ENST00000551706 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
CDK4-208ENST00000551706 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
CDK4-208ENST00000551706 AHNAKQ09666 5890 aaKnown RBP5.44□□□□□ -1.54
CDK4-208ENST00000551706 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
CDK4-208ENST00000551706 MUC5ACP98088 5654 aa5.36□□□□□ -1.55
CDK4-208ENST00000551706 MUC5BQ9HC84 5762 aaPredicted RBP5.32□□□□□ -1.56
CDK4-208ENST00000551706 KRTAP9-6A8MVA2 160 aa5.31□□□□□ -1.56
CDK4-208ENST00000551706 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
CDK4-208ENST00000551706 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
CDK4-208ENST00000551706 MT1AP04731 61 aa5.27□□□□□ -1.57
CDK4-208ENST00000551706 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
CDK4-208ENST00000551706 KRTAP5-8O75690 187 aa5.18□□□□□ -1.58
CDK4-208ENST00000551706 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
CDK4-208ENST00000551706 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
CDK4-208ENST00000551706 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
CDK4-208ENST00000551706 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
CDK4-208ENST00000551706 NDUFAF8A1L188 74 aa5□□□□□ -1.61
CDK4-208ENST00000551706 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
CDK4-208ENST00000551706 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
CDK4-208ENST00000551706 H3BS24 57 aa4.87□□□□□ -1.63
CDK4-208ENST00000551706 MT3P25713 68 aa4.83□□□□□ -1.64
CDK4-208ENST00000551706 KRTAP5-1Q6L8H4 278 aa4.65□□□□□ -1.67
CDK4-208ENST00000551706 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
CDK4-208ENST00000551706 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
CDK4-208ENST00000551706 INE1O15225 51 aa4.19□□□□□ -1.74
CDK4-208ENST00000551706 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
CDK4-208ENST00000551706 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
CDK4-208ENST00000551706 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
CDK4-208ENST00000551706 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
CDK4-208ENST00000551706 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
CDK4-208ENST00000551706 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
CDK4-208ENST00000551706 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
CDK4-208ENST00000551706 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
CDK4-208ENST00000551706 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
CDK4-208ENST00000551706 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
CDK4-208ENST00000551706 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
CDK4-208ENST00000551706 PRM1P04553 51 aa3.32□□□□□ -1.88
CDK4-208ENST00000551706 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
CDK4-208ENST00000551706 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
CDK4-208ENST00000551706 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
CDK4-208ENST00000551706 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 98.5 ms