RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
KRR1-204ENST00000550898 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
KRR1-204ENST00000550898 MT1XP80297 61 aa2.97□□□□□ -1.93
KRR1-204ENST00000550898 SYNE2Q8WXH0 6885 aaKnown RBP2.96□□□□□ -1.94
KRR1-204ENST00000550898 KRTAP13-4Q3LI77 160 aa2.92□□□□□ -1.94
KRR1-204ENST00000550898 A0A1B0GU69 56 aa2.91□□□□□ -1.94
KRR1-204ENST00000550898 A0A1B0GU33 70 aa2.9□□□□□ -1.95
KRR1-204ENST00000550898 KRTAP12-2P59991 146 aa2.9□□□□□ -1.95
KRR1-204ENST00000550898 CAMK2N1Q7Z7J9 78 aa2.89□□□□□ -1.95
KRR1-204ENST00000550898 CDC42SE1Q9NRR8 79 aa2.89□□□□□ -1.95
KRR1-204ENST00000550898 A0A0D9SG42 100 aa2.87□□□□□ -1.95
KRR1-204ENST00000550898 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
KRR1-204ENST00000550898 PRR15LQ9BU68 103 aa2.87□□□□□ -1.95
KRR1-204ENST00000550898 KRTAP8-1Q8IUC2 63 aa2.86□□□□□ -1.95
KRR1-204ENST00000550898 PSPHP1O15172 72 aa2.85□□□□□ -1.95
KRR1-204ENST00000550898 SPINT4Q6UDR6 99 aa2.83□□□□□ -1.96
KRR1-204ENST00000550898 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
KRR1-204ENST00000550898 LINC01558Q9Y6Z2 57 aa2.82□□□□□ -1.96
KRR1-204ENST00000550898 A6NED7 52 aa2.81□□□□□ -1.96
KRR1-204ENST00000550898 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
KRR1-204ENST00000550898 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
KRR1-204ENST00000550898 NEBP20929 6669 aa2.78□□□□□ -1.96
KRR1-204ENST00000550898 KMT2DO14686 5537 aa2.77□□□□□ -1.97
KRR1-204ENST00000550898 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
KRR1-204ENST00000550898 SPRR2EP22531 72 aa2.77□□□□□ -1.97
KRR1-204ENST00000550898 SPRR2BP35325 72 aa2.77□□□□□ -1.97
KRR1-204ENST00000550898 SPRR2AP35326 72 aa2.77□□□□□ -1.97
KRR1-204ENST00000550898 UQCR11O14957 56 aa2.75□□□□□ -1.97
KRR1-204ENST00000550898 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
KRR1-204ENST00000550898 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
KRR1-204ENST00000550898 MIR22HGQ0VDD5 57 aa2.7□□□□□ -1.98
KRR1-204ENST00000550898 TNP1P09430 55 aa2.68□□□□□ -1.98
KRR1-204ENST00000550898 SPRR2DP22532 72 aa2.68□□□□□ -1.98
KRR1-204ENST00000550898 K7ERS5 55 aa2.67□□□□□ -1.98
KRR1-204ENST00000550898 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
KRR1-204ENST00000550898 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
KRR1-204ENST00000550898 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.99
KRR1-204ENST00000550898 C10orf95Q9H7T3 257 aa2.65□□□□□ -1.99
KRR1-204ENST00000550898 MT1EP04732 61 aa2.63□□□□□ -1.99
KRR1-204ENST00000550898 ROMO1P60602 79 aa2.63□□□□□ -1.99
KRR1-204ENST00000550898 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
KRR1-204ENST00000550898 KRTAP19-3Q7Z4W3 81 aa2.61□□□□□ -1.99
KRR1-204ENST00000550898 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
KRR1-204ENST00000550898 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
KRR1-204ENST00000550898 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
KRR1-204ENST00000550898 KRTAP25-1Q3LHN0 102 aa2.58□□□□□ -2
KRR1-204ENST00000550898 PP632Q6XCG6 107 aa2.56□□□□□ -2
KRR1-204ENST00000550898 MT1GP13640 62 aa2.54□□□□□ -2
KRR1-204ENST00000550898 MT1LQ93083 61 aa2.53□□□□□ -2
KRR1-204ENST00000550898 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
KRR1-204ENST00000550898 MT1MQ8N339 61 aa2.5□□□□□ -2.01
KRR1-204ENST00000550898 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
KRR1-204ENST00000550898 LUZP6Q538Z0 58 aa2.39□□□□□ -2.03
KRR1-204ENST00000550898 DSTQ03001 7570 aaKnown RBP2.39□□□□□ -2.03
KRR1-204ENST00000550898 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
KRR1-204ENST00000550898 MT4P47944 62 aa2.32□□□□□ -2.04
KRR1-204ENST00000550898 SPRR5A0A1B0GTR4 108 aa2.27□□□□□ -2.05
KRR1-204ENST00000550898 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
KRR1-204ENST00000550898 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
KRR1-204ENST00000550898 KRTAP20-2Q3LI61 65 aa2.19□□□□□ -2.06
KRR1-204ENST00000550898 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
KRR1-204ENST00000550898 MT1AP04731 61 aa2.16□□□□□ -2.06
KRR1-204ENST00000550898 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
KRR1-204ENST00000550898 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
KRR1-204ENST00000550898 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
KRR1-204ENST00000550898 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
KRR1-204ENST00000550898 INE1O15225 51 aa2.11□□□□□ -2.07
KRR1-204ENST00000550898 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
KRR1-204ENST00000550898 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
KRR1-204ENST00000550898 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
KRR1-204ENST00000550898 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
KRR1-204ENST00000550898 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
KRR1-204ENST00000550898 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
KRR1-204ENST00000550898 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
KRR1-204ENST00000550898 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
KRR1-204ENST00000550898 PRM1P04553 51 aa1.26□□□□□ -2.21
KRR1-204ENST00000550898 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
KRR1-204ENST00000550898 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms