RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 SYNE2Q8WXH0 6885 aaKnown RBP7.33□□□□□ -1.24
PRDM4-205ENST00000550376 KRTAP9-6A8MVA2 160 aa7.26□□□□□ -1.25
PRDM4-205ENST00000550376 CRCT1Q9UGL9 99 aa7.21□□□□□ -1.26
PRDM4-205ENST00000550376 SPRR2FQ96RM1 72 aa7.18□□□□□ -1.26
PRDM4-205ENST00000550376 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
PRDM4-205ENST00000550376 DSTQ03001 7570 aaKnown RBP7.13□□□□□ -1.27
PRDM4-205ENST00000550376 KRTAP19-3Q7Z4W3 81 aa7.09□□□□□ -1.28
PRDM4-205ENST00000550376 MDN1Q9NU22 5596 aa7.08□□□□□ -1.28
PRDM4-205ENST00000550376 INE1O15225 51 aa7.06□□□□□ -1.28
PRDM4-205ENST00000550376 MT1MQ8N339 61 aa7.02□□□□□ -1.29
PRDM4-205ENST00000550376 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
PRDM4-205ENST00000550376 MT1GP13640 62 aa6.99□□□□□ -1.29
PRDM4-205ENST00000550376 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
PRDM4-205ENST00000550376 LCE5AQ5TCM9 118 aa6.92□□□□□ -1.3
PRDM4-205ENST00000550376 KRTAP5-9P26371 169 aa6.77□□□□□ -1.33
PRDM4-205ENST00000550376 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
PRDM4-205ENST00000550376 SPRR2EP22531 72 aa6.67□□□□□ -1.34
PRDM4-205ENST00000550376 SPRR2BP35325 72 aa6.67□□□□□ -1.34
PRDM4-205ENST00000550376 SPRR2AP35326 72 aa6.67□□□□□ -1.34
PRDM4-205ENST00000550376 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
PRDM4-205ENST00000550376 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
PRDM4-205ENST00000550376 KRTAP2-1Q9BYU5 128 aa6.66□□□□□ -1.34
PRDM4-205ENST00000550376 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
PRDM4-205ENST00000550376 KRTAP9-6A0A140TA67 174 aa6.64□□□□□ -1.35
PRDM4-205ENST00000550376 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
PRDM4-205ENST00000550376 SYNE1Q8NF91 8797 aaKnown RBP6.4□□□□□ -1.38
PRDM4-205ENST00000550376 SPRR2DP22532 72 aa6.38□□□□□ -1.39
PRDM4-205ENST00000550376 KRTAP6-1Q3LI64 71 aa6.31□□□□□ -1.4
PRDM4-205ENST00000550376 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
PRDM4-205ENST00000550376 KRTAP5-5Q701N2 237 aaPredicted RBP6.23□□□□□ -1.41
PRDM4-205ENST00000550376 MT1AP04731 61 aa6.17□□□□□ -1.42
PRDM4-205ENST00000550376 NEBP20929 6669 aa6.17□□□□□ -1.42
PRDM4-205ENST00000550376 KRTAP9-7A8MTY7 169 aa6.17□□□□□ -1.42
PRDM4-205ENST00000550376 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
PRDM4-205ENST00000550376 OBSCNQ5VST9 7968 aa5.92□□□□□ -1.46
PRDM4-205ENST00000550376 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
PRDM4-205ENST00000550376 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
PRDM4-205ENST00000550376 KRTAP6-2Q3LI66 62 aa5.76□□□□□ -1.49
PRDM4-205ENST00000550376 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
PRDM4-205ENST00000550376 MT4P47944 62 aa5.7□□□□□ -1.5
PRDM4-205ENST00000550376 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
PRDM4-205ENST00000550376 LCE3DQ9BYE3 92 aa5.68□□□□□ -1.5
PRDM4-205ENST00000550376 MT3P25713 68 aa5.58□□□□□ -1.52
PRDM4-205ENST00000550376 HMCN1Q96RW7 5635 aa5.55□□□□□ -1.52
PRDM4-205ENST00000550376 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
PRDM4-205ENST00000550376 KRTAP2-2Q9BYT5 123 aa5.52□□□□□ -1.53
PRDM4-205ENST00000550376 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
PRDM4-205ENST00000550376 KRTAP20-2Q3LI61 65 aa5.44□□□□□ -1.54
PRDM4-205ENST00000550376 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
PRDM4-205ENST00000550376 KRTAP20-1Q3LI63 56 aa5.43□□□□□ -1.54
PRDM4-205ENST00000550376 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
PRDM4-205ENST00000550376 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
PRDM4-205ENST00000550376 PRM1P04553 51 aa5.13□□□□□ -1.59
PRDM4-205ENST00000550376 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
PRDM4-205ENST00000550376 LCE1BQ5T7P3 118 aa4.7□□□□□ -1.66
PRDM4-205ENST00000550376 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
PRDM4-205ENST00000550376 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
PRDM4-205ENST00000550376 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
PRDM4-205ENST00000550376 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
PRDM4-205ENST00000550376 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
PRDM4-205ENST00000550376 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
PRDM4-205ENST00000550376 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
PRDM4-205ENST00000550376 LCE1CQ5T751 118 aa4.4□□□□□ -1.7
PRDM4-205ENST00000550376 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
PRDM4-205ENST00000550376 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.74
PRDM4-205ENST00000550376 GPR98Q8WXG9 6306 aa4.09□□□□□ -1.75
PRDM4-205ENST00000550376 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
PRDM4-205ENST00000550376 KRTAP21-2Q3LI59 83 aa4.07□□□□□ -1.76
PRDM4-205ENST00000550376 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
PRDM4-205ENST00000550376 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
PRDM4-205ENST00000550376 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
PRDM4-205ENST00000550376 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
PRDM4-205ENST00000550376 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
PRDM4-205ENST00000550376 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
PRDM4-205ENST00000550376 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
PRDM4-205ENST00000550376 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
PRDM4-205ENST00000550376 KRTAP21-1Q3LI58 79 aa3.21□□□□□ -1.9
PRDM4-205ENST00000550376 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 63 ms