RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 ROMO1P60602 79 aa6.31□□□□□ -1.4
BRF1-217ENST00000550375 SPRR2DP22532 72 aa6.31□□□□□ -1.4
BRF1-217ENST00000550375 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
BRF1-217ENST00000550375 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
BRF1-217ENST00000550375 KRTAP12-3P60328 96 aa6.19□□□□□ -1.42
BRF1-217ENST00000550375 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
BRF1-217ENST00000550375 LCE5AQ5TCM9 118 aa6.18□□□□□ -1.42
BRF1-217ENST00000550375 LCE3BQ5TA77 95 aa6.17□□□□□ -1.42
BRF1-217ENST00000550375 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.43
BRF1-217ENST00000550375 MT1LQ93083 61 aa6.15□□□□□ -1.43
BRF1-217ENST00000550375 MT1GP13640 62 aa6.11□□□□□ -1.43
BRF1-217ENST00000550375 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
BRF1-217ENST00000550375 MT1MQ8N339 61 aa6.04□□□□□ -1.44
BRF1-217ENST00000550375 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
BRF1-217ENST00000550375 PMAIP1Q13794 54 aa5.92□□□□□ -1.46
BRF1-217ENST00000550375 KRTAP15-1Q3LI76 137 aa5.92□□□□□ -1.46
BRF1-217ENST00000550375 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
BRF1-217ENST00000550375 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.47
BRF1-217ENST00000550375 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
BRF1-217ENST00000550375 GPR98Q8WXG9 6306 aa5.86□□□□□ -1.47
BRF1-217ENST00000550375 PRO0628Q9UI54 55 aa5.8□□□□□ -1.48
BRF1-217ENST00000550375 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
BRF1-217ENST00000550375 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
BRF1-217ENST00000550375 LCE1DQ5T752 114 aa5.67□□□□□ -1.5
BRF1-217ENST00000550375 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
BRF1-217ENST00000550375 LOC100996750A0A140TA64 210 aa5.58□□□□□ -1.52
BRF1-217ENST00000550375 MT4P47944 62 aa5.58□□□□□ -1.52
BRF1-217ENST00000550375 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
BRF1-217ENST00000550375 HMCN1Q96RW7 5635 aa5.53□□□□□ -1.52
BRF1-217ENST00000550375 KRTAP5-4Q6L8H1 288 aa5.49□□□□□ -1.53
BRF1-217ENST00000550375 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
BRF1-217ENST00000550375 KTN1-AS1Q86SY8 53 aa5.46□□□□□ -1.54
BRF1-217ENST00000550375 AHNAK2Q8IVF2 5795 aa5.44□□□□□ -1.54
BRF1-217ENST00000550375 KRTAP4-6Q9BYQ5 205 aa5.42□□□□□ -1.54
BRF1-217ENST00000550375 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
BRF1-217ENST00000550375 KRTAP5-10Q6L8G5 202 aa5.41□□□□□ -1.54
BRF1-217ENST00000550375 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
BRF1-217ENST00000550375 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
BRF1-217ENST00000550375 MT1AP04731 61 aa5.23□□□□□ -1.57
BRF1-217ENST00000550375 KRTAP5-7Q6L8G8 165 aa5.22□□□□□ -1.57
BRF1-217ENST00000550375 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
BRF1-217ENST00000550375 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
BRF1-217ENST00000550375 SPRR5A0A1B0GTR4 108 aa5.17□□□□□ -1.58
BRF1-217ENST00000550375 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
BRF1-217ENST00000550375 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
BRF1-217ENST00000550375 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
BRF1-217ENST00000550375 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
BRF1-217ENST00000550375 MT3P25713 68 aa4.77□□□□□ -1.65
BRF1-217ENST00000550375 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
BRF1-217ENST00000550375 LUZP6Q538Z0 58 aa4.65□□□□□ -1.66
BRF1-217ENST00000550375 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
BRF1-217ENST00000550375 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
BRF1-217ENST00000550375 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
BRF1-217ENST00000550375 AHNAKQ09666 5890 aaKnown RBP4.5□□□□□ -1.69
BRF1-217ENST00000550375 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
BRF1-217ENST00000550375 KRTAP9-9Q9BYP9 154 aa4.39□□□□□ -1.71
BRF1-217ENST00000550375 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
BRF1-217ENST00000550375 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
BRF1-217ENST00000550375 H3BS24 57 aa4.24□□□□□ -1.73
BRF1-217ENST00000550375 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
BRF1-217ENST00000550375 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
BRF1-217ENST00000550375 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
BRF1-217ENST00000550375 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
BRF1-217ENST00000550375 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
BRF1-217ENST00000550375 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
BRF1-217ENST00000550375 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
BRF1-217ENST00000550375 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
BRF1-217ENST00000550375 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
BRF1-217ENST00000550375 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
BRF1-217ENST00000550375 INE1O15225 51 aa3.44□□□□□ -1.86
BRF1-217ENST00000550375 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.86
BRF1-217ENST00000550375 LCE1FQ5T754 118 aa3.34□□□□□ -1.88
BRF1-217ENST00000550375 PRM1P04553 51 aa3.27□□□□□ -1.89
BRF1-217ENST00000550375 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
BRF1-217ENST00000550375 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
BRF1-217ENST00000550375 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
BRF1-217ENST00000550375 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
BRF1-217ENST00000550375 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 126 ms