RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 MRPL34Q9BQ48 92 aaKnown RBP2.68□□□□□ -1.98
TGFBR1-208ENST00000550253 H0YAA0 97 aa2.65□□□□□ -1.99
TGFBR1-208ENST00000550253 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
TGFBR1-208ENST00000550253 COX6B2Q6YFQ2 88 aa2.65□□□□□ -1.99
TGFBR1-208ENST00000550253 SYNE2Q8WXH0 6885 aaKnown RBP2.65□□□□□ -1.99
TGFBR1-208ENST00000550253 KRTAP13-4Q3LI77 160 aa2.64□□□□□ -1.99
TGFBR1-208ENST00000550253 RPL37P61927 97 aaKnown RBP2.63□□□□□ -1.99
TGFBR1-208ENST00000550253 CRIPTQ9P021 101 aa2.63□□□□□ -1.99
TGFBR1-208ENST00000550253 MACF1Q9UPN3 7388 aaKnown RBP2.61□□□□□ -1.99
TGFBR1-208ENST00000550253 SPRR1BP22528 89 aa2.61□□□□□ -1.99
TGFBR1-208ENST00000550253 MT2AP02795 61 aa2.6□□□□□ -1.99
TGFBR1-208ENST00000550253 MT1FP04733 61 aa2.59□□□□□ -1.99
TGFBR1-208ENST00000550253 H1FX-AS1Q4G0G2 97 aa2.59□□□□□ -1.99
TGFBR1-208ENST00000550253 PLAC4Q8WY50 150 aa2.57□□□□□ -2
TGFBR1-208ENST00000550253 KRTAP12-1P59990 96 aa2.56□□□□□ -2
TGFBR1-208ENST00000550253 INE1O15225 51 aa2.52□□□□□ -2.01
TGFBR1-208ENST00000550253 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
TGFBR1-208ENST00000550253 MUC12Q9UKN1 5478 aa2.52□□□□□ -2.01
TGFBR1-208ENST00000550253 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
TGFBR1-208ENST00000550253 C10orf95Q9H7T3 257 aa2.47□□□□□ -2.01
TGFBR1-208ENST00000550253 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
TGFBR1-208ENST00000550253 NEBP20929 6669 aa2.44□□□□□ -2.02
TGFBR1-208ENST00000550253 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
TGFBR1-208ENST00000550253 KRTAP20-1Q3LI63 56 aa2.41□□□□□ -2.02
TGFBR1-208ENST00000550253 MDN1Q9NU22 5596 aa2.4□□□□□ -2.03
TGFBR1-208ENST00000550253 KMT2DO14686 5537 aa2.38□□□□□ -2.03
TGFBR1-208ENST00000550253 S4R3F8 94 aa2.37□□□□□ -2.03
TGFBR1-208ENST00000550253 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
TGFBR1-208ENST00000550253 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
TGFBR1-208ENST00000550253 MT1BP07438 61 aa2.32□□□□□ -2.04
TGFBR1-208ENST00000550253 A0A0D9SG42 100 aa2.28□□□□□ -2.04
TGFBR1-208ENST00000550253 KRTAP2-3P0C7H8 128 aa2.28□□□□□ -2.04
TGFBR1-208ENST00000550253 KRTAP2-4Q9BYR9 128 aa2.28□□□□□ -2.04
TGFBR1-208ENST00000550253 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
TGFBR1-208ENST00000550253 KRTAP19-8Q3LI54 63 aa2.25□□□□□ -2.05
TGFBR1-208ENST00000550253 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
TGFBR1-208ENST00000550253 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
TGFBR1-208ENST00000550253 SPRR2GQ9BYE4 73 aa2.23□□□□□ -2.05
TGFBR1-208ENST00000550253 M0QZ58 72 aa2.22□□□□□ -2.05
TGFBR1-208ENST00000550253 SPRR2EP22531 72 aa2.22□□□□□ -2.05
TGFBR1-208ENST00000550253 SPRR2BP35325 72 aa2.22□□□□□ -2.05
TGFBR1-208ENST00000550253 SPRR2AP35326 72 aa2.22□□□□□ -2.05
TGFBR1-208ENST00000550253 SPRR2FQ96RM1 72 aa2.22□□□□□ -2.05
TGFBR1-208ENST00000550253 KRTAP2-1Q9BYU5 128 aa2.2□□□□□ -2.06
TGFBR1-208ENST00000550253 SPRR2DP22532 72 aa2.14□□□□□ -2.07
TGFBR1-208ENST00000550253 MT1XP80297 61 aa2.12□□□□□ -2.07
TGFBR1-208ENST00000550253 KRTAP8-1Q8IUC2 63 aa2.12□□□□□ -2.07
TGFBR1-208ENST00000550253 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.07
TGFBR1-208ENST00000550253 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
TGFBR1-208ENST00000550253 DSTQ03001 7570 aaKnown RBP2.02□□□□□ -2.09
TGFBR1-208ENST00000550253 TNP1P09430 55 aa1.98□□□□□ -2.09
TGFBR1-208ENST00000550253 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
TGFBR1-208ENST00000550253 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
TGFBR1-208ENST00000550253 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
TGFBR1-208ENST00000550253 KRTAP19-7Q3SYF9 63 aa1.91□□□□□ -2.1
TGFBR1-208ENST00000550253 MT4P47944 62 aa1.91□□□□□ -2.1
TGFBR1-208ENST00000550253 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.11
TGFBR1-208ENST00000550253 KRTAP19-3Q7Z4W3 81 aa1.89□□□□□ -2.11
TGFBR1-208ENST00000550253 MT1EP04732 61 aa1.88□□□□□ -2.11
TGFBR1-208ENST00000550253 MT1GP13640 62 aa1.81□□□□□ -2.12
TGFBR1-208ENST00000550253 MT1MQ8N339 61 aa1.81□□□□□ -2.12
TGFBR1-208ENST00000550253 KRTAP19-5Q3LI72 72 aa1.8□□□□□ -2.12
TGFBR1-208ENST00000550253 MT1LQ93083 61 aa1.77□□□□□ -2.13
TGFBR1-208ENST00000550253 KRTAP20-2Q3LI61 65 aa1.75□□□□□ -2.13
TGFBR1-208ENST00000550253 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
TGFBR1-208ENST00000550253 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
TGFBR1-208ENST00000550253 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
TGFBR1-208ENST00000550253 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
TGFBR1-208ENST00000550253 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
TGFBR1-208ENST00000550253 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
TGFBR1-208ENST00000550253 KRTAP6-1Q3LI64 71 aa1.52□□□□□ -2.17
TGFBR1-208ENST00000550253 MT1AP04731 61 aa1.48□□□□□ -2.17
TGFBR1-208ENST00000550253 KRTAP6-2Q3LI66 62 aa1.48□□□□□ -2.17
TGFBR1-208ENST00000550253 PRM1P04553 51 aa1.43□□□□□ -2.18
TGFBR1-208ENST00000550253 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
TGFBR1-208ENST00000550253 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
TGFBR1-208ENST00000550253 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 845.2 ms