RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 SPRR2AP35326 72 aa4.52□□□□□ -1.69
PFDN5-208ENST00000549995 C10orf95Q9H7T3 257 aa4.52□□□□□ -1.69
PFDN5-208ENST00000549995 PSPHP1O15172 72 aa4.51□□□□□ -1.69
PFDN5-208ENST00000549995 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
PFDN5-208ENST00000549995 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
PFDN5-208ENST00000549995 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
PFDN5-208ENST00000549995 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
PFDN5-208ENST00000549995 TNP1P09430 55 aa4.45□□□□□ -1.7
PFDN5-208ENST00000549995 MT1EP04732 61 aa4.44□□□□□ -1.7
PFDN5-208ENST00000549995 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
PFDN5-208ENST00000549995 K7ERS5 55 aa4.38□□□□□ -1.71
PFDN5-208ENST00000549995 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
PFDN5-208ENST00000549995 A6NED7 52 aa4.37□□□□□ -1.71
PFDN5-208ENST00000549995 SPRR2DP22532 72 aa4.37□□□□□ -1.71
PFDN5-208ENST00000549995 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
PFDN5-208ENST00000549995 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
PFDN5-208ENST00000549995 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
PFDN5-208ENST00000549995 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
PFDN5-208ENST00000549995 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
PFDN5-208ENST00000549995 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
PFDN5-208ENST00000549995 MT1GP13640 62 aa4.28□□□□□ -1.72
PFDN5-208ENST00000549995 MT1LQ93083 61 aa4.27□□□□□ -1.73
PFDN5-208ENST00000549995 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
PFDN5-208ENST00000549995 KRTAP12-3P60328 96 aa4.22□□□□□ -1.73
PFDN5-208ENST00000549995 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
PFDN5-208ENST00000549995 MT1MQ8N339 61 aa4.21□□□□□ -1.74
PFDN5-208ENST00000549995 ROMO1P60602 79 aa4.16□□□□□ -1.74
PFDN5-208ENST00000549995 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
PFDN5-208ENST00000549995 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
PFDN5-208ENST00000549995 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
PFDN5-208ENST00000549995 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
PFDN5-208ENST00000549995 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
PFDN5-208ENST00000549995 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
PFDN5-208ENST00000549995 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.79
PFDN5-208ENST00000549995 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
PFDN5-208ENST00000549995 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
PFDN5-208ENST00000549995 MT4P47944 62 aa3.77□□□□□ -1.81
PFDN5-208ENST00000549995 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
PFDN5-208ENST00000549995 PMAIP1Q13794 54 aa3.72□□□□□ -1.81
PFDN5-208ENST00000549995 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
PFDN5-208ENST00000549995 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
PFDN5-208ENST00000549995 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
PFDN5-208ENST00000549995 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
PFDN5-208ENST00000549995 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
PFDN5-208ENST00000549995 MT1AP04731 61 aa3.65□□□□□ -1.83
PFDN5-208ENST00000549995 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
PFDN5-208ENST00000549995 PRO0628Q9UI54 55 aa3.65□□□□□ -1.83
PFDN5-208ENST00000549995 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
PFDN5-208ENST00000549995 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
PFDN5-208ENST00000549995 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
PFDN5-208ENST00000549995 KTN1-AS1Q86SY8 53 aa3.46□□□□□ -1.86
PFDN5-208ENST00000549995 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
PFDN5-208ENST00000549995 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
PFDN5-208ENST00000549995 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
PFDN5-208ENST00000549995 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
PFDN5-208ENST00000549995 MT3P25713 68 aa3.3□□□□□ -1.88
PFDN5-208ENST00000549995 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
PFDN5-208ENST00000549995 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
PFDN5-208ENST00000549995 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
PFDN5-208ENST00000549995 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
PFDN5-208ENST00000549995 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
PFDN5-208ENST00000549995 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
PFDN5-208ENST00000549995 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
PFDN5-208ENST00000549995 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
PFDN5-208ENST00000549995 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
PFDN5-208ENST00000549995 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
PFDN5-208ENST00000549995 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
PFDN5-208ENST00000549995 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
PFDN5-208ENST00000549995 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
PFDN5-208ENST00000549995 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
PFDN5-208ENST00000549995 NDUFAF8A1L188 74 aa2.51□□□□□ -2.01
PFDN5-208ENST00000549995 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
PFDN5-208ENST00000549995 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
PFDN5-208ENST00000549995 INE1O15225 51 aa2.12□□□□□ -2.07
PFDN5-208ENST00000549995 PRM1P04553 51 aa2.12□□□□□ -2.07
PFDN5-208ENST00000549995 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
PFDN5-208ENST00000549995 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
PFDN5-208ENST00000549995 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms