RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 MT1LQ93083 61 aa4.34□□□□□ -1.71
CALCOCO1-217ENST00000549935 MT1EP04732 61 aa4.33□□□□□ -1.72
CALCOCO1-217ENST00000549935 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
CALCOCO1-217ENST00000549935 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
CALCOCO1-217ENST00000549935 CRCT1Q9UGL9 99 aa4.18□□□□□ -1.74
CALCOCO1-217ENST00000549935 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
CALCOCO1-217ENST00000549935 FCGBPQ9Y6R7 5405 aaPredicted RBP4.14□□□□□ -1.75
CALCOCO1-217ENST00000549935 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
CALCOCO1-217ENST00000549935 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
CALCOCO1-217ENST00000549935 MT1GP13640 62 aa4.08□□□□□ -1.76
CALCOCO1-217ENST00000549935 MT1MQ8N339 61 aa4.05□□□□□ -1.76
CALCOCO1-217ENST00000549935 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
CALCOCO1-217ENST00000549935 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
CALCOCO1-217ENST00000549935 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
CALCOCO1-217ENST00000549935 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
CALCOCO1-217ENST00000549935 SPRR2FQ96RM1 72 aa3.91□□□□□ -1.78
CALCOCO1-217ENST00000549935 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.91□□□□□ -1.78
CALCOCO1-217ENST00000549935 SYNE2Q8WXH0 6885 aaKnown RBP3.9□□□□□ -1.78
CALCOCO1-217ENST00000549935 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.79
CALCOCO1-217ENST00000549935 MT1AP04731 61 aa3.83□□□□□ -1.8
CALCOCO1-217ENST00000549935 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
CALCOCO1-217ENST00000549935 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
CALCOCO1-217ENST00000549935 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
CALCOCO1-217ENST00000549935 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
CALCOCO1-217ENST00000549935 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
CALCOCO1-217ENST00000549935 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
CALCOCO1-217ENST00000549935 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
CALCOCO1-217ENST00000549935 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
CALCOCO1-217ENST00000549935 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
CALCOCO1-217ENST00000549935 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
CALCOCO1-217ENST00000549935 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
CALCOCO1-217ENST00000549935 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
CALCOCO1-217ENST00000549935 PRM1P04553 51 aa3.56□□□□□ -1.84
CALCOCO1-217ENST00000549935 NEBP20929 6669 aa3.56□□□□□ -1.84
CALCOCO1-217ENST00000549935 SPRR2EP22531 72 aa3.53□□□□□ -1.84
CALCOCO1-217ENST00000549935 SPRR2BP35325 72 aa3.53□□□□□ -1.84
CALCOCO1-217ENST00000549935 SPRR2AP35326 72 aa3.53□□□□□ -1.84
CALCOCO1-217ENST00000549935 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
CALCOCO1-217ENST00000549935 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.86
CALCOCO1-217ENST00000549935 SPRR2DP22532 72 aa3.37□□□□□ -1.87
CALCOCO1-217ENST00000549935 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
CALCOCO1-217ENST00000549935 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.87
CALCOCO1-217ENST00000549935 MT3P25713 68 aa3.26□□□□□ -1.89
CALCOCO1-217ENST00000549935 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
CALCOCO1-217ENST00000549935 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
CALCOCO1-217ENST00000549935 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
CALCOCO1-217ENST00000549935 MT4P47944 62 aa3□□□□□ -1.93
CALCOCO1-217ENST00000549935 LCE4AQ5TA78 99 aa3□□□□□ -1.93
CALCOCO1-217ENST00000549935 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
CALCOCO1-217ENST00000549935 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
CALCOCO1-217ENST00000549935 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.94
CALCOCO1-217ENST00000549935 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.94
CALCOCO1-217ENST00000549935 LCE1DQ5T752 114 aa2.9□□□□□ -1.95
CALCOCO1-217ENST00000549935 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
CALCOCO1-217ENST00000549935 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
CALCOCO1-217ENST00000549935 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
CALCOCO1-217ENST00000549935 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
CALCOCO1-217ENST00000549935 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
CALCOCO1-217ENST00000549935 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
CALCOCO1-217ENST00000549935 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
CALCOCO1-217ENST00000549935 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
CALCOCO1-217ENST00000549935 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
CALCOCO1-217ENST00000549935 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
CALCOCO1-217ENST00000549935 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
CALCOCO1-217ENST00000549935 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
CALCOCO1-217ENST00000549935 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
CALCOCO1-217ENST00000549935 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
CALCOCO1-217ENST00000549935 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
CALCOCO1-217ENST00000549935 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
CALCOCO1-217ENST00000549935 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
CALCOCO1-217ENST00000549935 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
CALCOCO1-217ENST00000549935 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
CALCOCO1-217ENST00000549935 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
CALCOCO1-217ENST00000549935 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
CALCOCO1-217ENST00000549935 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
CALCOCO1-217ENST00000549935 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
CALCOCO1-217ENST00000549935 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
CALCOCO1-217ENST00000549935 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 93.6 ms