RNA–Protein interactions for RNA: ENST00000549648.5

WDR90-216, Transcript of WD repeat domain 90, humanhuman

TSL 1 (best)

Gene WDR90, Length 2,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-216ENST00000549648 KRTAP2-4Q9BYR9 128 aa6.59□□□□□ -1.36
WDR90-216ENST00000549648 KRTAP2-1Q9BYU5 128 aa6.59□□□□□ -1.36
WDR90-216ENST00000549648 KRTAP9-6A8MVA2 160 aa6.56□□□□□ -1.36
WDR90-216ENST00000549648 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
WDR90-216ENST00000549648 SYNE2Q8WXH0 6885 aaKnown RBP6.51□□□□□ -1.37
WDR90-216ENST00000549648 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.38□□□□□ -1.39
WDR90-216ENST00000549648 MT1EP04732 61 aa6.36□□□□□ -1.39
WDR90-216ENST00000549648 KRTAP4-7Q9BYR0 210 aa6.36□□□□□ -1.39
WDR90-216ENST00000549648 MT1LQ93083 61 aa6.33□□□□□ -1.4
WDR90-216ENST00000549648 KRTAP9-7A8MTY7 169 aa6.18□□□□□ -1.42
WDR90-216ENST00000549648 MUC12Q9UKN1 5478 aa6.16□□□□□ -1.42
WDR90-216ENST00000549648 MDN1Q9NU22 5596 aa6.08□□□□□ -1.44
WDR90-216ENST00000549648 KRTAP6-3Q3LI67 103 aa6.03□□□□□ -1.44
WDR90-216ENST00000549648 MT1GP13640 62 aa5.99□□□□□ -1.45
WDR90-216ENST00000549648 KRTAP19-3Q7Z4W3 81 aa5.99□□□□□ -1.45
WDR90-216ENST00000549648 SPRR2FQ96RM1 72 aa5.97□□□□□ -1.45
WDR90-216ENST00000549648 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.46
WDR90-216ENST00000549648 MT1MQ8N339 61 aa5.94□□□□□ -1.46
WDR90-216ENST00000549648 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
WDR90-216ENST00000549648 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
WDR90-216ENST00000549648 NEBP20929 6669 aa5.85□□□□□ -1.47
WDR90-216ENST00000549648 KRTAP12-4P60329 112 aa5.82□□□□□ -1.48
WDR90-216ENST00000549648 LCE5AQ5TCM9 118 aa5.81□□□□□ -1.48
WDR90-216ENST00000549648 SPRR2EP22531 72 aa5.75□□□□□ -1.49
WDR90-216ENST00000549648 SPRR2BP35325 72 aa5.75□□□□□ -1.49
WDR90-216ENST00000549648 SPRR2AP35326 72 aa5.75□□□□□ -1.49
WDR90-216ENST00000549648 LCE1AQ5T7P2 110 aa5.71□□□□□ -1.49
WDR90-216ENST00000549648 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
WDR90-216ENST00000549648 MT1AP04731 61 aa5.55□□□□□ -1.52
WDR90-216ENST00000549648 SPRR2DP22532 72 aa5.53□□□□□ -1.52
WDR90-216ENST00000549648 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
WDR90-216ENST00000549648 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
WDR90-216ENST00000549648 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
WDR90-216ENST00000549648 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
WDR90-216ENST00000549648 LCE3DQ9BYE3 92 aa5.33□□□□□ -1.56
WDR90-216ENST00000549648 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
WDR90-216ENST00000549648 KRTAP5-5Q701N2 237 aaPredicted RBP5.31□□□□□ -1.56
WDR90-216ENST00000549648 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
WDR90-216ENST00000549648 PRM1P04553 51 aa5.2□□□□□ -1.58
WDR90-216ENST00000549648 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
WDR90-216ENST00000549648 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
WDR90-216ENST00000549648 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
WDR90-216ENST00000549648 MT4P47944 62 aa4.89□□□□□ -1.63
WDR90-216ENST00000549648 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
WDR90-216ENST00000549648 KRTAP5-4Q6L8H1 288 aa4.84□□□□□ -1.63
WDR90-216ENST00000549648 MT3P25713 68 aa4.83□□□□□ -1.64
WDR90-216ENST00000549648 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
WDR90-216ENST00000549648 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
WDR90-216ENST00000549648 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
WDR90-216ENST00000549648 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
WDR90-216ENST00000549648 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
WDR90-216ENST00000549648 AHNAK2Q8IVF2 5795 aa4.49□□□□□ -1.69
WDR90-216ENST00000549648 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
WDR90-216ENST00000549648 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
WDR90-216ENST00000549648 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.7
WDR90-216ENST00000549648 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
WDR90-216ENST00000549648 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
WDR90-216ENST00000549648 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
WDR90-216ENST00000549648 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
WDR90-216ENST00000549648 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
WDR90-216ENST00000549648 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
WDR90-216ENST00000549648 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
WDR90-216ENST00000549648 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
WDR90-216ENST00000549648 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
WDR90-216ENST00000549648 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
WDR90-216ENST00000549648 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
WDR90-216ENST00000549648 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
WDR90-216ENST00000549648 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
WDR90-216ENST00000549648 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
WDR90-216ENST00000549648 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
WDR90-216ENST00000549648 KRTAP21-1Q3LI58 79 aa3.43□□□□□ -1.86
WDR90-216ENST00000549648 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
WDR90-216ENST00000549648 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
WDR90-216ENST00000549648 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
WDR90-216ENST00000549648 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
WDR90-216ENST00000549648 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
WDR90-216ENST00000549648 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
WDR90-216ENST00000549648 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 120.7 ms