RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 LCE4AQ5TA78 99 aa6.83□□□□□ -1.32
SLC48A1-207ENST00000549243 CCDC179H3BU77 68 aa6.82□□□□□ -1.32
SLC48A1-207ENST00000549243 RPS28P62857 69 aaKnown RBP6.81□□□□□ -1.32
SLC48A1-207ENST00000549243 PRR15LQ9BU68 103 aa6.81□□□□□ -1.32
SLC48A1-207ENST00000549243 HMCN1Q96RW7 5635 aa6.76□□□□□ -1.33
SLC48A1-207ENST00000549243 ATP5EP56381 51 aaPredicted RBP6.73□□□□□ -1.33
SLC48A1-207ENST00000549243 LINC01558Q9Y6Z2 57 aa6.7□□□□□ -1.34
SLC48A1-207ENST00000549243 TMEM258P61165 79 aa6.67□□□□□ -1.34
SLC48A1-207ENST00000549243 KRTAP5-4Q6L8H1 288 aa6.67□□□□□ -1.34
SLC48A1-207ENST00000549243 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.34
SLC48A1-207ENST00000549243 KRTAP12-3P60328 96 aa6.64□□□□□ -1.35
SLC48A1-207ENST00000549243 KRTAP4-6Q9BYQ5 205 aa6.62□□□□□ -1.35
SLC48A1-207ENST00000549243 UQCR11O14957 56 aa6.58□□□□□ -1.36
SLC48A1-207ENST00000549243 AHNAK2Q8IVF2 5795 aa6.58□□□□□ -1.36
SLC48A1-207ENST00000549243 KRTAP5-10Q6L8G5 202 aa6.45□□□□□ -1.38
SLC48A1-207ENST00000549243 MIR22HGQ0VDD5 57 aa6.43□□□□□ -1.38
SLC48A1-207ENST00000549243 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
SLC48A1-207ENST00000549243 PRO0628Q9UI54 55 aa6.42□□□□□ -1.38
SLC48A1-207ENST00000549243 KRTAP5-5Q701N2 237 aaPredicted RBP6.36□□□□□ -1.39
SLC48A1-207ENST00000549243 KRTAP20-2Q3LI61 65 aa6.33□□□□□ -1.4
SLC48A1-207ENST00000549243 K7ERS5 55 aa6.32□□□□□ -1.4
SLC48A1-207ENST00000549243 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
SLC48A1-207ENST00000549243 KRTAP5-3Q6L8H2 238 aa6.29□□□□□ -1.4
SLC48A1-207ENST00000549243 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
SLC48A1-207ENST00000549243 PSPHP1O15172 72 aa6.26□□□□□ -1.41
SLC48A1-207ENST00000549243 KRTAP12-4P60329 112 aa6.24□□□□□ -1.41
SLC48A1-207ENST00000549243 KRTAP5-7Q6L8G8 165 aa6.2□□□□□ -1.42
SLC48A1-207ENST00000549243 SYNE1Q8NF91 8797 aaKnown RBP6.17□□□□□ -1.42
SLC48A1-207ENST00000549243 V9GYY9 64 aa6.17□□□□□ -1.42
SLC48A1-207ENST00000549243 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
SLC48A1-207ENST00000549243 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
SLC48A1-207ENST00000549243 Q1T7F1 81 aa6.13□□□□□ -1.43
SLC48A1-207ENST00000549243 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
SLC48A1-207ENST00000549243 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
SLC48A1-207ENST00000549243 BRK1Q8WUW1 75 aa6.07□□□□□ -1.44
SLC48A1-207ENST00000549243 A6NED7 52 aa6.03□□□□□ -1.44
SLC48A1-207ENST00000549243 PMAIP1Q13794 54 aa6□□□□□ -1.45
SLC48A1-207ENST00000549243 CDC42SE1Q9NRR8 79 aa5.98□□□□□ -1.45
SLC48A1-207ENST00000549243 MT1AP04731 61 aa5.9□□□□□ -1.46
SLC48A1-207ENST00000549243 KRTAP6-1Q3LI64 71 aa5.9□□□□□ -1.46
SLC48A1-207ENST00000549243 ROMO1P60602 79 aa5.87□□□□□ -1.47
SLC48A1-207ENST00000549243 KTN1-AS1Q86SY8 53 aa5.83□□□□□ -1.48
SLC48A1-207ENST00000549243 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
SLC48A1-207ENST00000549243 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
SLC48A1-207ENST00000549243 KRTAP9-6A8MVA2 160 aa5.78□□□□□ -1.48
SLC48A1-207ENST00000549243 KRTAP9-4Q9BYQ2 154 aa5.72□□□□□ -1.49
SLC48A1-207ENST00000549243 KRTAP6-2Q3LI66 62 aa5.67□□□□□ -1.5
SLC48A1-207ENST00000549243 KRTAP5-8O75690 187 aa5.62□□□□□ -1.51
SLC48A1-207ENST00000549243 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.52
SLC48A1-207ENST00000549243 MUC5ACP98088 5654 aa5.42□□□□□ -1.54
SLC48A1-207ENST00000549243 AHNAKQ09666 5890 aaKnown RBP5.42□□□□□ -1.54
SLC48A1-207ENST00000549243 MUC5BQ9HC84 5762 aaPredicted RBP5.41□□□□□ -1.54
SLC48A1-207ENST00000549243 MT3P25713 68 aa5.4□□□□□ -1.54
SLC48A1-207ENST00000549243 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
SLC48A1-207ENST00000549243 KRTAP5-1Q6L8H4 278 aa5.25□□□□□ -1.57
SLC48A1-207ENST00000549243 PRAC1Q96KF2 57 aa5.24□□□□□ -1.57
SLC48A1-207ENST00000549243 H3BS24 57 aa5.15□□□□□ -1.59
SLC48A1-207ENST00000549243 LCE1EQ5T753 118 aa4.95□□□□□ -1.62
SLC48A1-207ENST00000549243 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
SLC48A1-207ENST00000549243 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
SLC48A1-207ENST00000549243 LCE1CQ5T751 118 aa4.61□□□□□ -1.67
SLC48A1-207ENST00000549243 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
SLC48A1-207ENST00000549243 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
SLC48A1-207ENST00000549243 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
SLC48A1-207ENST00000549243 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
SLC48A1-207ENST00000549243 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
SLC48A1-207ENST00000549243 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
SLC48A1-207ENST00000549243 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
SLC48A1-207ENST00000549243 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
SLC48A1-207ENST00000549243 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
SLC48A1-207ENST00000549243 INE1O15225 51 aa3.97□□□□□ -1.77
SLC48A1-207ENST00000549243 KRTAP21-2Q3LI59 83 aa3.87□□□□□ -1.79
SLC48A1-207ENST00000549243 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
SLC48A1-207ENST00000549243 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
SLC48A1-207ENST00000549243 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
SLC48A1-207ENST00000549243 PRM1P04553 51 aa3.02□□□□□ -1.93
SLC48A1-207ENST00000549243 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
SLC48A1-207ENST00000549243 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 56.4 ms