RNA–Protein interactions for RNA: ENST00000548265.1

PACS2-207, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 2

Gene PACS2, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-207ENST00000548265 LCE3AQ5TA76 89 aa5.92□□□□□ -1.46
PACS2-207ENST00000548265 PP632Q6XCG6 107 aa5.92□□□□□ -1.46
PACS2-207ENST00000548265 KTN1-AS1Q86SY8 53 aa5.86□□□□□ -1.47
PACS2-207ENST00000548265 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
PACS2-207ENST00000548265 KRTAP19-5Q3LI72 72 aa5.76□□□□□ -1.49
PACS2-207ENST00000548265 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
PACS2-207ENST00000548265 PRAC1Q96KF2 57 aa5.76□□□□□ -1.49
PACS2-207ENST00000548265 SPRR2DP22532 72 aa5.74□□□□□ -1.49
PACS2-207ENST00000548265 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
PACS2-207ENST00000548265 KRTAP19-7Q3SYF9 63 aa5.7□□□□□ -1.5
PACS2-207ENST00000548265 MT1EP04732 61 aa5.65□□□□□ -1.5
PACS2-207ENST00000548265 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
PACS2-207ENST00000548265 SVIPQ8NHG7 77 aa5.59□□□□□ -1.51
PACS2-207ENST00000548265 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
PACS2-207ENST00000548265 DSTQ03001 7570 aaKnown RBP5.56□□□□□ -1.52
PACS2-207ENST00000548265 KRTAP19-3Q7Z4W3 81 aa5.51□□□□□ -1.53
PACS2-207ENST00000548265 MT1LQ93083 61 aa5.5□□□□□ -1.53
PACS2-207ENST00000548265 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
PACS2-207ENST00000548265 MT1GP13640 62 aa5.46□□□□□ -1.54
PACS2-207ENST00000548265 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
PACS2-207ENST00000548265 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
PACS2-207ENST00000548265 MT1MQ8N339 61 aa5.35□□□□□ -1.55
PACS2-207ENST00000548265 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
PACS2-207ENST00000548265 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
PACS2-207ENST00000548265 AHNAK2Q8IVF2 5795 aa5.28□□□□□ -1.56
PACS2-207ENST00000548265 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
PACS2-207ENST00000548265 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
PACS2-207ENST00000548265 KRTAP5-10Q6L8G5 202 aa5.2□□□□□ -1.58
PACS2-207ENST00000548265 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
PACS2-207ENST00000548265 KRTAP5-7Q6L8G8 165 aa5.1□□□□□ -1.59
PACS2-207ENST00000548265 MT4P47944 62 aa5.06□□□□□ -1.6
PACS2-207ENST00000548265 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
PACS2-207ENST00000548265 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
PACS2-207ENST00000548265 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
PACS2-207ENST00000548265 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
PACS2-207ENST00000548265 KRTAP5-3Q6L8H2 238 aa4.91□□□□□ -1.62
PACS2-207ENST00000548265 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
PACS2-207ENST00000548265 KRTAP5-4Q6L8H1 288 aa4.84□□□□□ -1.63
PACS2-207ENST00000548265 KRTAP4-6Q9BYQ5 205 aa4.83□□□□□ -1.64
PACS2-207ENST00000548265 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
PACS2-207ENST00000548265 MT1AP04731 61 aa4.71□□□□□ -1.66
PACS2-207ENST00000548265 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
PACS2-207ENST00000548265 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
PACS2-207ENST00000548265 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
PACS2-207ENST00000548265 AHNAKQ09666 5890 aaKnown RBP4.58□□□□□ -1.68
PACS2-207ENST00000548265 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
PACS2-207ENST00000548265 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
PACS2-207ENST00000548265 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
PACS2-207ENST00000548265 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
PACS2-207ENST00000548265 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
PACS2-207ENST00000548265 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
PACS2-207ENST00000548265 MT3P25713 68 aa4.32□□□□□ -1.72
PACS2-207ENST00000548265 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
PACS2-207ENST00000548265 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
PACS2-207ENST00000548265 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
PACS2-207ENST00000548265 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
PACS2-207ENST00000548265 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
PACS2-207ENST00000548265 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
PACS2-207ENST00000548265 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
PACS2-207ENST00000548265 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
PACS2-207ENST00000548265 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
PACS2-207ENST00000548265 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
PACS2-207ENST00000548265 INE1O15225 51 aa3.76□□□□□ -1.81
PACS2-207ENST00000548265 H3BS24 57 aa3.69□□□□□ -1.82
PACS2-207ENST00000548265 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
PACS2-207ENST00000548265 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
PACS2-207ENST00000548265 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
PACS2-207ENST00000548265 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
PACS2-207ENST00000548265 PRM1P04553 51 aa3.2□□□□□ -1.9
PACS2-207ENST00000548265 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
PACS2-207ENST00000548265 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
PACS2-207ENST00000548265 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
PACS2-207ENST00000548265 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
PACS2-207ENST00000548265 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
PACS2-207ENST00000548265 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
PACS2-207ENST00000548265 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
PACS2-207ENST00000548265 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
PACS2-207ENST00000548265 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 55.4 ms