RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SPINT4Q6UDR6 99 aa4.65□□□□□ -1.67
RAB5C-204ENST00000547517 ROMO1P60602 79 aa4.62□□□□□ -1.67
RAB5C-204ENST00000547517 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
RAB5C-204ENST00000547517 KRTAP25-1Q3LHN0 102 aa4.6□□□□□ -1.67
RAB5C-204ENST00000547517 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
RAB5C-204ENST00000547517 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
RAB5C-204ENST00000547517 SPRR2DP22532 72 aa4.51□□□□□ -1.69
RAB5C-204ENST00000547517 LCE4AQ5TA78 99 aa4.49□□□□□ -1.69
RAB5C-204ENST00000547517 LCE3BQ5TA77 95 aa4.46□□□□□ -1.7
RAB5C-204ENST00000547517 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
RAB5C-204ENST00000547517 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
RAB5C-204ENST00000547517 MT1EP04732 61 aa4.4□□□□□ -1.71
RAB5C-204ENST00000547517 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
RAB5C-204ENST00000547517 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
RAB5C-204ENST00000547517 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
RAB5C-204ENST00000547517 TNP1P09430 55 aa4.37□□□□□ -1.71
RAB5C-204ENST00000547517 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
RAB5C-204ENST00000547517 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
RAB5C-204ENST00000547517 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
RAB5C-204ENST00000547517 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
RAB5C-204ENST00000547517 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
RAB5C-204ENST00000547517 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
RAB5C-204ENST00000547517 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
RAB5C-204ENST00000547517 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
RAB5C-204ENST00000547517 MT1GP13640 62 aa4.23□□□□□ -1.73
RAB5C-204ENST00000547517 MT1LQ93083 61 aa4.22□□□□□ -1.73
RAB5C-204ENST00000547517 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
RAB5C-204ENST00000547517 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
RAB5C-204ENST00000547517 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
RAB5C-204ENST00000547517 MT1MQ8N339 61 aa4.18□□□□□ -1.74
RAB5C-204ENST00000547517 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
RAB5C-204ENST00000547517 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
RAB5C-204ENST00000547517 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
RAB5C-204ENST00000547517 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
RAB5C-204ENST00000547517 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
RAB5C-204ENST00000547517 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.76
RAB5C-204ENST00000547517 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
RAB5C-204ENST00000547517 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
RAB5C-204ENST00000547517 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
RAB5C-204ENST00000547517 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
RAB5C-204ENST00000547517 MT4P47944 62 aa3.95□□□□□ -1.78
RAB5C-204ENST00000547517 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
RAB5C-204ENST00000547517 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
RAB5C-204ENST00000547517 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
RAB5C-204ENST00000547517 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
RAB5C-204ENST00000547517 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
RAB5C-204ENST00000547517 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
RAB5C-204ENST00000547517 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
RAB5C-204ENST00000547517 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
RAB5C-204ENST00000547517 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
RAB5C-204ENST00000547517 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
RAB5C-204ENST00000547517 MT1AP04731 61 aa3.59□□□□□ -1.83
RAB5C-204ENST00000547517 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
RAB5C-204ENST00000547517 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
RAB5C-204ENST00000547517 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
RAB5C-204ENST00000547517 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
RAB5C-204ENST00000547517 INE1O15225 51 aa3.44□□□□□ -1.86
RAB5C-204ENST00000547517 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
RAB5C-204ENST00000547517 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
RAB5C-204ENST00000547517 MT3P25713 68 aa3.27□□□□□ -1.89
RAB5C-204ENST00000547517 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
RAB5C-204ENST00000547517 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
RAB5C-204ENST00000547517 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
RAB5C-204ENST00000547517 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
RAB5C-204ENST00000547517 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
RAB5C-204ENST00000547517 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
RAB5C-204ENST00000547517 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
RAB5C-204ENST00000547517 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
RAB5C-204ENST00000547517 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
RAB5C-204ENST00000547517 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
RAB5C-204ENST00000547517 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
RAB5C-204ENST00000547517 PRM1P04553 51 aa2.37□□□□□ -2.03
RAB5C-204ENST00000547517 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
RAB5C-204ENST00000547517 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
RAB5C-204ENST00000547517 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
RAB5C-204ENST00000547517 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
RAB5C-204ENST00000547517 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 33.2 ms