RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
LETMD1-209ENST00000547318 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
LETMD1-209ENST00000547318 KMT2DO14686 5537 aa4.82□□□□□ -1.64
LETMD1-209ENST00000547318 MT1GP13640 62 aa4.81□□□□□ -1.64
LETMD1-209ENST00000547318 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
LETMD1-209ENST00000547318 MT1MQ8N339 61 aa4.74□□□□□ -1.65
LETMD1-209ENST00000547318 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
LETMD1-209ENST00000547318 FSIP2Q5CZC0 6907 aa4.68□□□□□ -1.66
LETMD1-209ENST00000547318 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
LETMD1-209ENST00000547318 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
LETMD1-209ENST00000547318 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.67
LETMD1-209ENST00000547318 SPRR2FQ96RM1 72 aa4.52□□□□□ -1.69
LETMD1-209ENST00000547318 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
LETMD1-209ENST00000547318 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
LETMD1-209ENST00000547318 FCGBPQ9Y6R7 5405 aaPredicted RBP4.39□□□□□ -1.71
LETMD1-209ENST00000547318 MT1AP04731 61 aa4.39□□□□□ -1.71
LETMD1-209ENST00000547318 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
LETMD1-209ENST00000547318 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
LETMD1-209ENST00000547318 LCE3BQ5TA77 95 aa4.28□□□□□ -1.72
LETMD1-209ENST00000547318 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
LETMD1-209ENST00000547318 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
LETMD1-209ENST00000547318 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
LETMD1-209ENST00000547318 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
LETMD1-209ENST00000547318 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
LETMD1-209ENST00000547318 SYNE2Q8WXH0 6885 aaKnown RBP4.17□□□□□ -1.74
LETMD1-209ENST00000547318 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
LETMD1-209ENST00000547318 SPRR2EP22531 72 aa4.14□□□□□ -1.75
LETMD1-209ENST00000547318 SPRR2BP35325 72 aa4.14□□□□□ -1.75
LETMD1-209ENST00000547318 SPRR2AP35326 72 aa4.14□□□□□ -1.75
LETMD1-209ENST00000547318 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
LETMD1-209ENST00000547318 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
LETMD1-209ENST00000547318 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
LETMD1-209ENST00000547318 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
LETMD1-209ENST00000547318 DSTQ03001 7570 aaKnown RBP3.98□□□□□ -1.77
LETMD1-209ENST00000547318 SPRR2DP22532 72 aa3.97□□□□□ -1.77
LETMD1-209ENST00000547318 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
LETMD1-209ENST00000547318 NEBP20929 6669 aa3.97□□□□□ -1.77
LETMD1-209ENST00000547318 MT3P25713 68 aa3.9□□□□□ -1.78
LETMD1-209ENST00000547318 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
LETMD1-209ENST00000547318 KRTAP20-1Q3LI63 56 aa3.85□□□□□ -1.79
LETMD1-209ENST00000547318 PRM1P04553 51 aa3.85□□□□□ -1.79
LETMD1-209ENST00000547318 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
LETMD1-209ENST00000547318 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
LETMD1-209ENST00000547318 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
LETMD1-209ENST00000547318 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
LETMD1-209ENST00000547318 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
LETMD1-209ENST00000547318 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
LETMD1-209ENST00000547318 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
LETMD1-209ENST00000547318 MT4P47944 62 aa3.39□□□□□ -1.87
LETMD1-209ENST00000547318 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
LETMD1-209ENST00000547318 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
LETMD1-209ENST00000547318 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
LETMD1-209ENST00000547318 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
LETMD1-209ENST00000547318 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
LETMD1-209ENST00000547318 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
LETMD1-209ENST00000547318 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
LETMD1-209ENST00000547318 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
LETMD1-209ENST00000547318 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
LETMD1-209ENST00000547318 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
LETMD1-209ENST00000547318 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
LETMD1-209ENST00000547318 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
LETMD1-209ENST00000547318 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
LETMD1-209ENST00000547318 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
LETMD1-209ENST00000547318 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
LETMD1-209ENST00000547318 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
LETMD1-209ENST00000547318 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
LETMD1-209ENST00000547318 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
LETMD1-209ENST00000547318 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
LETMD1-209ENST00000547318 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
LETMD1-209ENST00000547318 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
LETMD1-209ENST00000547318 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
LETMD1-209ENST00000547318 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
LETMD1-209ENST00000547318 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
LETMD1-209ENST00000547318 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
LETMD1-209ENST00000547318 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
LETMD1-209ENST00000547318 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
LETMD1-209ENST00000547318 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
LETMD1-209ENST00000547318 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 328 ms