RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 LCE5AQ5TCM9 118 aa4.31□□□□□ -1.72
RAB5C-203ENST00000546881 K7ERS5 55 aa4.3□□□□□ -1.72
RAB5C-203ENST00000546881 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
RAB5C-203ENST00000546881 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
RAB5C-203ENST00000546881 MT1EP04732 61 aa4.28□□□□□ -1.72
RAB5C-203ENST00000546881 PMAIP1Q13794 54 aa4.26□□□□□ -1.73
RAB5C-203ENST00000546881 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
RAB5C-203ENST00000546881 TNP1P09430 55 aa4.18□□□□□ -1.74
RAB5C-203ENST00000546881 MT4P47944 62 aa4.18□□□□□ -1.74
RAB5C-203ENST00000546881 ROMO1P60602 79 aa4.17□□□□□ -1.74
RAB5C-203ENST00000546881 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
RAB5C-203ENST00000546881 KRTAP19-5Q3LI72 72 aa4.16□□□□□ -1.74
RAB5C-203ENST00000546881 MT1GP13640 62 aa4.15□□□□□ -1.75
RAB5C-203ENST00000546881 PP632Q6XCG6 107 aa4.15□□□□□ -1.75
RAB5C-203ENST00000546881 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
RAB5C-203ENST00000546881 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
RAB5C-203ENST00000546881 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
RAB5C-203ENST00000546881 MT1MQ8N339 61 aa4.1□□□□□ -1.75
RAB5C-203ENST00000546881 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
RAB5C-203ENST00000546881 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
RAB5C-203ENST00000546881 MT1LQ93083 61 aa4.06□□□□□ -1.76
RAB5C-203ENST00000546881 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
RAB5C-203ENST00000546881 KRTAP25-1Q3LHN0 102 aa4.04□□□□□ -1.76
RAB5C-203ENST00000546881 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
RAB5C-203ENST00000546881 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
RAB5C-203ENST00000546881 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
RAB5C-203ENST00000546881 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
RAB5C-203ENST00000546881 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
RAB5C-203ENST00000546881 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
RAB5C-203ENST00000546881 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
RAB5C-203ENST00000546881 KRTAP4-7Q9BYR0 210 aa3.88□□□□□ -1.79
RAB5C-203ENST00000546881 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
RAB5C-203ENST00000546881 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
RAB5C-203ENST00000546881 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
RAB5C-203ENST00000546881 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
RAB5C-203ENST00000546881 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
RAB5C-203ENST00000546881 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
RAB5C-203ENST00000546881 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
RAB5C-203ENST00000546881 KRTAP19-4Q3LI73 84 aa3.65□□□□□ -1.83
RAB5C-203ENST00000546881 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
RAB5C-203ENST00000546881 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
RAB5C-203ENST00000546881 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
RAB5C-203ENST00000546881 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
RAB5C-203ENST00000546881 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
RAB5C-203ENST00000546881 MT1AP04731 61 aa3.44□□□□□ -1.86
RAB5C-203ENST00000546881 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
RAB5C-203ENST00000546881 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
RAB5C-203ENST00000546881 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
RAB5C-203ENST00000546881 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
RAB5C-203ENST00000546881 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
RAB5C-203ENST00000546881 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
RAB5C-203ENST00000546881 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
RAB5C-203ENST00000546881 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
RAB5C-203ENST00000546881 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
RAB5C-203ENST00000546881 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.89
RAB5C-203ENST00000546881 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
RAB5C-203ENST00000546881 H3BS24 57 aa3.2□□□□□ -1.9
RAB5C-203ENST00000546881 MT3P25713 68 aa3.17□□□□□ -1.9
RAB5C-203ENST00000546881 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
RAB5C-203ENST00000546881 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
RAB5C-203ENST00000546881 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
RAB5C-203ENST00000546881 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
RAB5C-203ENST00000546881 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
RAB5C-203ENST00000546881 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
RAB5C-203ENST00000546881 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
RAB5C-203ENST00000546881 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
RAB5C-203ENST00000546881 INE1O15225 51 aa2.62□□□□□ -1.99
RAB5C-203ENST00000546881 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
RAB5C-203ENST00000546881 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
RAB5C-203ENST00000546881 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
RAB5C-203ENST00000546881 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
RAB5C-203ENST00000546881 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
RAB5C-203ENST00000546881 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
RAB5C-203ENST00000546881 PRM1P04553 51 aa2.18□□□□□ -2.06
RAB5C-203ENST00000546881 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
RAB5C-203ENST00000546881 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
RAB5C-203ENST00000546881 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
RAB5C-203ENST00000546881 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms