RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
LTBR-215ENST00000546296 LCE3BQ5TA77 95 aa6.04□□□□□ -1.44
LTBR-215ENST00000546296 KRTAP2-2Q9BYT5 123 aa6.03□□□□□ -1.44
LTBR-215ENST00000546296 KRTAP2-1Q9BYU5 128 aa6.03□□□□□ -1.44
LTBR-215ENST00000546296 MT1GP13640 62 aa6.02□□□□□ -1.45
LTBR-215ENST00000546296 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
LTBR-215ENST00000546296 ROMO1P60602 79 aa6.01□□□□□ -1.45
LTBR-215ENST00000546296 MT1LQ93083 61 aa6□□□□□ -1.45
LTBR-215ENST00000546296 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
LTBR-215ENST00000546296 KRTAP23-1A1A580 65 aa5.93□□□□□ -1.46
LTBR-215ENST00000546296 MT1MQ8N339 61 aa5.91□□□□□ -1.46
LTBR-215ENST00000546296 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
LTBR-215ENST00000546296 BRK1Q8WUW1 75 aa5.82□□□□□ -1.48
LTBR-215ENST00000546296 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
LTBR-215ENST00000546296 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
LTBR-215ENST00000546296 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
LTBR-215ENST00000546296 KRTAP19-4Q3LI73 84 aa5.67□□□□□ -1.5
LTBR-215ENST00000546296 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
LTBR-215ENST00000546296 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
LTBR-215ENST00000546296 LCE4AQ5TA78 99 aa5.52□□□□□ -1.53
LTBR-215ENST00000546296 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
LTBR-215ENST00000546296 MT4P47944 62 aa5.44□□□□□ -1.54
LTBR-215ENST00000546296 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
LTBR-215ENST00000546296 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
LTBR-215ENST00000546296 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
LTBR-215ENST00000546296 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
LTBR-215ENST00000546296 HMCN1Q96RW7 5635 aa5.36□□□□□ -1.55
LTBR-215ENST00000546296 KRTAP5-5Q701N2 237 aaPredicted RBP5.35□□□□□ -1.55
LTBR-215ENST00000546296 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
LTBR-215ENST00000546296 KRTAP4-6Q9BYQ5 205 aa5.29□□□□□ -1.56
LTBR-215ENST00000546296 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
LTBR-215ENST00000546296 PRAC1Q96KF2 57 aa5.21□□□□□ -1.58
LTBR-215ENST00000546296 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
LTBR-215ENST00000546296 GPR98Q8WXG9 6306 aa5.19□□□□□ -1.58
LTBR-215ENST00000546296 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
LTBR-215ENST00000546296 KRTAP20-2Q3LI61 65 aa5.13□□□□□ -1.59
LTBR-215ENST00000546296 MT1AP04731 61 aa5.11□□□□□ -1.59
LTBR-215ENST00000546296 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
LTBR-215ENST00000546296 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
LTBR-215ENST00000546296 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
LTBR-215ENST00000546296 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
LTBR-215ENST00000546296 H3BS24 57 aa4.97□□□□□ -1.61
LTBR-215ENST00000546296 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
LTBR-215ENST00000546296 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
LTBR-215ENST00000546296 KRTAP5-10Q6L8G5 202 aa4.87□□□□□ -1.63
LTBR-215ENST00000546296 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
LTBR-215ENST00000546296 KRTAP5-2Q701N4 177 aa4.8□□□□□ -1.64
LTBR-215ENST00000546296 MT3P25713 68 aa4.69□□□□□ -1.66
LTBR-215ENST00000546296 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.67
LTBR-215ENST00000546296 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
LTBR-215ENST00000546296 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
LTBR-215ENST00000546296 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
LTBR-215ENST00000546296 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
LTBR-215ENST00000546296 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
LTBR-215ENST00000546296 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
LTBR-215ENST00000546296 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
LTBR-215ENST00000546296 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
LTBR-215ENST00000546296 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
LTBR-215ENST00000546296 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
LTBR-215ENST00000546296 AHNAKQ09666 5890 aaKnown RBP4.12□□□□□ -1.75
LTBR-215ENST00000546296 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
LTBR-215ENST00000546296 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
LTBR-215ENST00000546296 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
LTBR-215ENST00000546296 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
LTBR-215ENST00000546296 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
LTBR-215ENST00000546296 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
LTBR-215ENST00000546296 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
LTBR-215ENST00000546296 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
LTBR-215ENST00000546296 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
LTBR-215ENST00000546296 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
LTBR-215ENST00000546296 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
LTBR-215ENST00000546296 INE1O15225 51 aa3.08□□□□□ -1.92
LTBR-215ENST00000546296 PRM1P04553 51 aa3.08□□□□□ -1.92
LTBR-215ENST00000546296 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
LTBR-215ENST00000546296 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
LTBR-215ENST00000546296 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
LTBR-215ENST00000546296 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
LTBR-215ENST00000546296 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 65.4 ms