RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 SPRR2BP35325 72 aa6.26□□□□□ -1.41
CADM1-220ENST00000546000 SPRR2AP35326 72 aa6.26□□□□□ -1.41
CADM1-220ENST00000546000 PRAC1Q96KF2 57 aa6.25□□□□□ -1.41
CADM1-220ENST00000546000 KRTAP2-2Q9BYT5 123 aa6.24□□□□□ -1.41
CADM1-220ENST00000546000 KRTAP2-1Q9BYU5 128 aa6.24□□□□□ -1.41
CADM1-220ENST00000546000 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
CADM1-220ENST00000546000 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
CADM1-220ENST00000546000 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.42
CADM1-220ENST00000546000 KTN1-AS1Q86SY8 53 aa6.13□□□□□ -1.43
CADM1-220ENST00000546000 MT1LQ93083 61 aa6.09□□□□□ -1.43
CADM1-220ENST00000546000 KRTAP19-3Q7Z4W3 81 aa6.07□□□□□ -1.44
CADM1-220ENST00000546000 SPRR2DP22532 72 aa6.06□□□□□ -1.44
CADM1-220ENST00000546000 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
CADM1-220ENST00000546000 LCE5AQ5TCM9 118 aa6□□□□□ -1.45
CADM1-220ENST00000546000 MT1MQ8N339 61 aa5.94□□□□□ -1.46
CADM1-220ENST00000546000 GPR98Q8WXG9 6306 aa5.93□□□□□ -1.46
CADM1-220ENST00000546000 MT1GP13640 62 aa5.93□□□□□ -1.46
CADM1-220ENST00000546000 LCE3BQ5TA77 95 aa5.93□□□□□ -1.46
CADM1-220ENST00000546000 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
CADM1-220ENST00000546000 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.46
CADM1-220ENST00000546000 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
CADM1-220ENST00000546000 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
CADM1-220ENST00000546000 SVIPQ8NHG7 77 aa5.85□□□□□ -1.47
CADM1-220ENST00000546000 DSTQ03001 7570 aaKnown RBP5.8□□□□□ -1.48
CADM1-220ENST00000546000 LCE3CQ5T5A8 94 aa5.78□□□□□ -1.48
CADM1-220ENST00000546000 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
CADM1-220ENST00000546000 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
CADM1-220ENST00000546000 KRTAP9-6A8MVA2 160 aa5.54□□□□□ -1.52
CADM1-220ENST00000546000 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
CADM1-220ENST00000546000 HMCN1Q96RW7 5635 aa5.44□□□□□ -1.54
CADM1-220ENST00000546000 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
CADM1-220ENST00000546000 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
CADM1-220ENST00000546000 KRTAP5-5Q701N2 237 aaPredicted RBP5.37□□□□□ -1.55
CADM1-220ENST00000546000 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
CADM1-220ENST00000546000 KRTAP4-12Q9BQ66 201 aa5.3□□□□□ -1.56
CADM1-220ENST00000546000 MT4P47944 62 aa5.29□□□□□ -1.56
CADM1-220ENST00000546000 KRTAP5-10Q6L8G5 202 aa5.28□□□□□ -1.56
CADM1-220ENST00000546000 KRTAP5-4Q6L8H1 288 aa5.27□□□□□ -1.57
CADM1-220ENST00000546000 H3BS24 57 aa5.22□□□□□ -1.57
CADM1-220ENST00000546000 MT1AP04731 61 aa5.17□□□□□ -1.58
CADM1-220ENST00000546000 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
CADM1-220ENST00000546000 KRTAP5-7Q6L8G8 165 aa5.16□□□□□ -1.58
CADM1-220ENST00000546000 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
CADM1-220ENST00000546000 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
CADM1-220ENST00000546000 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
CADM1-220ENST00000546000 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
CADM1-220ENST00000546000 KRTAP12-4P60329 112 aa5□□□□□ -1.61
CADM1-220ENST00000546000 LUZP6Q538Z0 58 aa4.98□□□□□ -1.61
CADM1-220ENST00000546000 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
CADM1-220ENST00000546000 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
CADM1-220ENST00000546000 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
CADM1-220ENST00000546000 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
CADM1-220ENST00000546000 MT3P25713 68 aa4.66□□□□□ -1.66
CADM1-220ENST00000546000 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
CADM1-220ENST00000546000 AHNAKQ09666 5890 aaKnown RBP4.59□□□□□ -1.67
CADM1-220ENST00000546000 KRTAP4-2Q9BYR5 136 aa4.59□□□□□ -1.67
CADM1-220ENST00000546000 MUC5ACP98088 5654 aa4.54□□□□□ -1.68
CADM1-220ENST00000546000 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
CADM1-220ENST00000546000 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
CADM1-220ENST00000546000 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
CADM1-220ENST00000546000 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
CADM1-220ENST00000546000 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
CADM1-220ENST00000546000 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
CADM1-220ENST00000546000 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
CADM1-220ENST00000546000 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
CADM1-220ENST00000546000 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
CADM1-220ENST00000546000 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
CADM1-220ENST00000546000 INE1O15225 51 aa3.78□□□□□ -1.8
CADM1-220ENST00000546000 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
CADM1-220ENST00000546000 PRM1P04553 51 aa3.49□□□□□ -1.85
CADM1-220ENST00000546000 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
CADM1-220ENST00000546000 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
CADM1-220ENST00000546000 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
CADM1-220ENST00000546000 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
CADM1-220ENST00000546000 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
CADM1-220ENST00000546000 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
CADM1-220ENST00000546000 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
CADM1-220ENST00000546000 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms