RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
LTBR-213ENST00000544454 KRTAP20-1Q3LI63 56 aa5.17□□□□□ -1.58
LTBR-213ENST00000544454 TNP1P09430 55 aa5.16□□□□□ -1.58
LTBR-213ENST00000544454 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
LTBR-213ENST00000544454 K7ERS5 55 aa5.12□□□□□ -1.59
LTBR-213ENST00000544454 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
LTBR-213ENST00000544454 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
LTBR-213ENST00000544454 A6NED7 52 aa5.08□□□□□ -1.6
LTBR-213ENST00000544454 MT1EP04732 61 aa5.08□□□□□ -1.6
LTBR-213ENST00000544454 SPRR2DP22532 72 aa5.08□□□□□ -1.6
LTBR-213ENST00000544454 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
LTBR-213ENST00000544454 LCE3AQ5TA76 89 aa5.03□□□□□ -1.6
LTBR-213ENST00000544454 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
LTBR-213ENST00000544454 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
LTBR-213ENST00000544454 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
LTBR-213ENST00000544454 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
LTBR-213ENST00000544454 MT1GP13640 62 aa4.93□□□□□ -1.62
LTBR-213ENST00000544454 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
LTBR-213ENST00000544454 MT1LQ93083 61 aa4.89□□□□□ -1.63
LTBR-213ENST00000544454 PP632Q6XCG6 107 aa4.88□□□□□ -1.63
LTBR-213ENST00000544454 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
LTBR-213ENST00000544454 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
LTBR-213ENST00000544454 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
LTBR-213ENST00000544454 MT1MQ8N339 61 aa4.81□□□□□ -1.64
LTBR-213ENST00000544454 ROMO1P60602 79 aa4.8□□□□□ -1.64
LTBR-213ENST00000544454 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
LTBR-213ENST00000544454 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
LTBR-213ENST00000544454 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
LTBR-213ENST00000544454 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
LTBR-213ENST00000544454 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
LTBR-213ENST00000544454 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
LTBR-213ENST00000544454 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
LTBR-213ENST00000544454 MT4P47944 62 aa4.42□□□□□ -1.7
LTBR-213ENST00000544454 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
LTBR-213ENST00000544454 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
LTBR-213ENST00000544454 GPR98Q8WXG9 6306 aa4.31□□□□□ -1.72
LTBR-213ENST00000544454 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
LTBR-213ENST00000544454 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
LTBR-213ENST00000544454 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
LTBR-213ENST00000544454 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
LTBR-213ENST00000544454 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
LTBR-213ENST00000544454 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
LTBR-213ENST00000544454 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
LTBR-213ENST00000544454 MT1AP04731 61 aa4.16□□□□□ -1.74
LTBR-213ENST00000544454 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
LTBR-213ENST00000544454 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
LTBR-213ENST00000544454 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
LTBR-213ENST00000544454 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
LTBR-213ENST00000544454 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
LTBR-213ENST00000544454 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
LTBR-213ENST00000544454 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
LTBR-213ENST00000544454 MT3P25713 68 aa3.82□□□□□ -1.8
LTBR-213ENST00000544454 SVIPQ8NHG7 77 aa3.73□□□□□ -1.81
LTBR-213ENST00000544454 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
LTBR-213ENST00000544454 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
LTBR-213ENST00000544454 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
LTBR-213ENST00000544454 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
LTBR-213ENST00000544454 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
LTBR-213ENST00000544454 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
LTBR-213ENST00000544454 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
LTBR-213ENST00000544454 LUZP6Q538Z0 58 aa3.47□□□□□ -1.85
LTBR-213ENST00000544454 A0A0A0MQY5 61 aa3.44□□□□□ -1.86
LTBR-213ENST00000544454 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
LTBR-213ENST00000544454 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
LTBR-213ENST00000544454 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
LTBR-213ENST00000544454 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
LTBR-213ENST00000544454 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
LTBR-213ENST00000544454 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
LTBR-213ENST00000544454 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
LTBR-213ENST00000544454 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
LTBR-213ENST00000544454 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
LTBR-213ENST00000544454 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
LTBR-213ENST00000544454 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
LTBR-213ENST00000544454 PRM1P04553 51 aa2.45□□□□□ -2.02
LTBR-213ENST00000544454 INE1O15225 51 aa2.42□□□□□ -2.02
LTBR-213ENST00000544454 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
LTBR-213ENST00000544454 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
LTBR-213ENST00000544454 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 53.6 ms