RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 MT1EP04732 61 aa5.48□□□□□ -1.53
SNRNP70-203ENST00000544278 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
SNRNP70-203ENST00000544278 MT1LQ93083 61 aa5.46□□□□□ -1.53
SNRNP70-203ENST00000544278 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
SNRNP70-203ENST00000544278 MACF1Q9UPN3 7388 aaKnown RBP5.44□□□□□ -1.54
SNRNP70-203ENST00000544278 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
SNRNP70-203ENST00000544278 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
SNRNP70-203ENST00000544278 KRTAP19-6Q3LI70 58 aa5.39□□□□□ -1.55
SNRNP70-203ENST00000544278 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
SNRNP70-203ENST00000544278 MT1GP13640 62 aa5.32□□□□□ -1.56
SNRNP70-203ENST00000544278 MDN1Q9NU22 5596 aa5.26□□□□□ -1.57
SNRNP70-203ENST00000544278 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
SNRNP70-203ENST00000544278 MT1MQ8N339 61 aa5.15□□□□□ -1.59
SNRNP70-203ENST00000544278 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
SNRNP70-203ENST00000544278 KRTAP2-2Q9BYT5 123 aa5.11□□□□□ -1.59
SNRNP70-203ENST00000544278 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
SNRNP70-203ENST00000544278 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
SNRNP70-203ENST00000544278 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
SNRNP70-203ENST00000544278 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
SNRNP70-203ENST00000544278 LCE5AQ5TCM9 118 aa5.01□□□□□ -1.61
SNRNP70-203ENST00000544278 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
SNRNP70-203ENST00000544278 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
SNRNP70-203ENST00000544278 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
SNRNP70-203ENST00000544278 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
SNRNP70-203ENST00000544278 LCE1FQ5T754 118 aa4.81□□□□□ -1.64
SNRNP70-203ENST00000544278 LCE1AQ5T7P2 110 aa4.76□□□□□ -1.65
SNRNP70-203ENST00000544278 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
SNRNP70-203ENST00000544278 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
SNRNP70-203ENST00000544278 SPRR2EP22531 72 aa4.74□□□□□ -1.65
SNRNP70-203ENST00000544278 SPRR2BP35325 72 aa4.74□□□□□ -1.65
SNRNP70-203ENST00000544278 SPRR2AP35326 72 aa4.74□□□□□ -1.65
SNRNP70-203ENST00000544278 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
SNRNP70-203ENST00000544278 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
SNRNP70-203ENST00000544278 KRTAP5-9P26371 169 aa4.59□□□□□ -1.67
SNRNP70-203ENST00000544278 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.68
SNRNP70-203ENST00000544278 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
SNRNP70-203ENST00000544278 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
SNRNP70-203ENST00000544278 MT1AP04731 61 aa4.5□□□□□ -1.69
SNRNP70-203ENST00000544278 SPRR2DP22532 72 aa4.5□□□□□ -1.69
SNRNP70-203ENST00000544278 PRM1P04553 51 aa4.46□□□□□ -1.7
SNRNP70-203ENST00000544278 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
SNRNP70-203ENST00000544278 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
SNRNP70-203ENST00000544278 NEBP20929 6669 aa4.39□□□□□ -1.71
SNRNP70-203ENST00000544278 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
SNRNP70-203ENST00000544278 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
SNRNP70-203ENST00000544278 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
SNRNP70-203ENST00000544278 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
SNRNP70-203ENST00000544278 MT4P47944 62 aa4.17□□□□□ -1.74
SNRNP70-203ENST00000544278 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
SNRNP70-203ENST00000544278 MT3P25713 68 aa4.08□□□□□ -1.76
SNRNP70-203ENST00000544278 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
SNRNP70-203ENST00000544278 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
SNRNP70-203ENST00000544278 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
SNRNP70-203ENST00000544278 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
SNRNP70-203ENST00000544278 MUC19Q7Z5P9 8384 aa3.76□□□□□ -1.81
SNRNP70-203ENST00000544278 MUC5ACP98088 5654 aa3.65□□□□□ -1.82
SNRNP70-203ENST00000544278 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
SNRNP70-203ENST00000544278 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
SNRNP70-203ENST00000544278 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
SNRNP70-203ENST00000544278 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
SNRNP70-203ENST00000544278 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
SNRNP70-203ENST00000544278 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
SNRNP70-203ENST00000544278 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
SNRNP70-203ENST00000544278 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
SNRNP70-203ENST00000544278 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
SNRNP70-203ENST00000544278 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
SNRNP70-203ENST00000544278 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
SNRNP70-203ENST00000544278 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
SNRNP70-203ENST00000544278 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
SNRNP70-203ENST00000544278 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
SNRNP70-203ENST00000544278 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
SNRNP70-203ENST00000544278 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
SNRNP70-203ENST00000544278 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
SNRNP70-203ENST00000544278 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
SNRNP70-203ENST00000544278 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
SNRNP70-203ENST00000544278 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
SNRNP70-203ENST00000544278 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
SNRNP70-203ENST00000544278 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 145 ms