RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 PKHD1L1Q86WI1 4243 aa0.5□□□□□ -2.33
MDM2-230ENST00000543323 PCLOQ9Y6V0 5065 aa0.5□□□□□ -2.33
MDM2-230ENST00000543323 FAT3Q8TDW7 4589 aa0.5□□□□□ -2.33
MDM2-230ENST00000543323 ABCA13Q86UQ4 5058 aa0.49□□□□□ -2.33
MDM2-230ENST00000543323 H3BUT2 72 aa0.49□□□□□ -2.33
MDM2-230ENST00000543323 LINC00308Q8TCZ7 52 aa0.49□□□□□ -2.33
MDM2-230ENST00000543323 HERC1Q15751 4861 aa0.49□□□□□ -2.33
MDM2-230ENST00000543323 DNAH8Q96JB1 4490 aa0.48□□□□□ -2.33
MDM2-230ENST00000543323 LINC01546A6NGU7 62 aa0.48□□□□□ -2.33
MDM2-230ENST00000543323 C3orf79P0CE67 100 aa0.48□□□□□ -2.33
MDM2-230ENST00000543323 KCNQ1DNQ9H478 68 aa0.48□□□□□ -2.33
MDM2-230ENST00000543323 TNXBP22105 4242 aa0.48□□□□□ -2.33
MDM2-230ENST00000543323 LPAP08519 4548 aa0.47□□□□□ -2.33
MDM2-230ENST00000543323 LRP2P98164 4655 aa0.47□□□□□ -2.33
MDM2-230ENST00000543323 BVES-AS1Q5T3Y7 98 aa0.47□□□□□ -2.33
MDM2-230ENST00000543323 MRPL34Q9BQ48 92 aaKnown RBP0.47□□□□□ -2.33
MDM2-230ENST00000543323 IGLV5-48A0A075B6I7 105 aa0.46□□□□□ -2.34
MDM2-230ENST00000543323 NDUFB1O75438 58 aa0.46□□□□□ -2.34
MDM2-230ENST00000543323 RPS29P62273 56 aaKnown RBP0.46□□□□□ -2.34
MDM2-230ENST00000543323 ATXN8Q156A1 80 aa0.46□□□□□ -2.34
MDM2-230ENST00000543323 WFDC13Q8IUB5 93 aa0.46□□□□□ -2.34
MDM2-230ENST00000543323 UBR4Q5T4S7 5183 aa0.45□□□□□ -2.34
MDM2-230ENST00000543323 H0YGX0 51 aa0.45□□□□□ -2.34
MDM2-230ENST00000543323 HMCN2Q8NDA2 5059 aa0.44□□□□□ -2.34
MDM2-230ENST00000543323 MT1HP80294 61 aa0.44□□□□□ -2.34
MDM2-230ENST00000543323 NREPQ16612 68 aa0.44□□□□□ -2.34
MDM2-230ENST00000543323 MUC2Q02817 5179 aa0.43□□□□□ -2.34
MDM2-230ENST00000543323 UBL5Q9BZL1 73 aa0.43□□□□□ -2.34
MDM2-230ENST00000543323 S4R3F8 94 aa0.43□□□□□ -2.34
MDM2-230ENST00000543323 RNF213Q63HN8 5207 aa0.42□□□□□ -2.34
MDM2-230ENST00000543323 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
MDM2-230ENST00000543323 MMP24-AS1A0A0U1RRL7 71 aa0.42□□□□□ -2.34
MDM2-230ENST00000543323 H1FX-AS1Q4G0G2 97 aa0.42□□□□□ -2.34
MDM2-230ENST00000543323 MUC17Q685J3 4493 aa0.42□□□□□ -2.34
MDM2-230ENST00000543323 MT2AP02795 61 aa0.41□□□□□ -2.34
MDM2-230ENST00000543323 MT1FP04733 61 aa0.41□□□□□ -2.34
MDM2-230ENST00000543323 KRTAP19-2Q3LHN2 52 aa0.41□□□□□ -2.34
MDM2-230ENST00000543323 ATP5EP2Q5VTU8 51 aa0.41□□□□□ -2.34
MDM2-230ENST00000543323 FLGP20930 4061 aaPredicted RBP0.41□□□□□ -2.34
MDM2-230ENST00000543323 M0QZ58 72 aa0.39□□□□□ -2.35
MDM2-230ENST00000543323 SPRR2FQ96RM1 72 aa0.38□□□□□ -2.35
MDM2-230ENST00000543323 MUC5ACP98088 5654 aa0.37□□□□□ -2.35
MDM2-230ENST00000543323 SPRR2EP22531 72 aa0.37□□□□□ -2.35
MDM2-230ENST00000543323 SPRR2BP35325 72 aa0.37□□□□□ -2.35
MDM2-230ENST00000543323 SPRR2AP35326 72 aa0.37□□□□□ -2.35
MDM2-230ENST00000543323 KRTAP20-1Q3LI63 56 aa0.37□□□□□ -2.35
MDM2-230ENST00000543323 KRTAP19-6Q3LI70 58 aa0.37□□□□□ -2.35
MDM2-230ENST00000543323 KRTAP8-1Q8IUC2 63 aa0.37□□□□□ -2.35
MDM2-230ENST00000543323 SSPOA2VEC9 5147 aa0.36□□□□□ -2.35
MDM2-230ENST00000543323 MT1BP07438 61 aa0.36□□□□□ -2.35
MDM2-230ENST00000543323 SPRR2DP22532 72 aa0.36□□□□□ -2.35
MDM2-230ENST00000543323 SPRR2GQ9BYE4 73 aa0.36□□□□□ -2.35
MDM2-230ENST00000543323 USH2AO75445 5202 aa0.36□□□□□ -2.35
MDM2-230ENST00000543323 H0YAA0 97 aa0.35□□□□□ -2.35
MDM2-230ENST00000543323 MT1XP80297 61 aa0.35□□□□□ -2.35
MDM2-230ENST00000543323 KRTAP19-8Q3LI54 63 aa0.35□□□□□ -2.35
MDM2-230ENST00000543323 PRM1P04553 51 aa0.34□□□□□ -2.36
MDM2-230ENST00000543323 FSIP2Q5CZC0 6907 aa0.33□□□□□ -2.36
MDM2-230ENST00000543323 TNP1P09430 55 aa0.33□□□□□ -2.36
MDM2-230ENST00000543323 MT4P47944 62 aa0.32□□□□□ -2.36
MDM2-230ENST00000543323 KRTAP19-5Q3LI72 72 aa0.32□□□□□ -2.36
MDM2-230ENST00000543323 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
MDM2-230ENST00000543323 MT1EP04732 61 aa0.31□□□□□ -2.36
MDM2-230ENST00000543323 KMT2DO14686 5537 aa0.31□□□□□ -2.36
MDM2-230ENST00000543323 KRTAP19-7Q3SYF9 63 aa0.3□□□□□ -2.36
MDM2-230ENST00000543323 MT1MQ8N339 61 aa0.3□□□□□ -2.36
MDM2-230ENST00000543323 MUC12Q9UKN1 5478 aa0.3□□□□□ -2.36
MDM2-230ENST00000543323 MT1GP13640 62 aa0.29□□□□□ -2.36
MDM2-230ENST00000543323 MT1LQ93083 61 aa0.29□□□□□ -2.36
MDM2-230ENST00000543323 MACF1Q9UPN3 7388 aaKnown RBP0.28□□□□□ -2.36
MDM2-230ENST00000543323 KRTAP20-2Q3LI61 65 aa0.27□□□□□ -2.37
MDM2-230ENST00000543323 SYNE2Q8WXH0 6885 aaKnown RBP0.26□□□□□ -2.37
MDM2-230ENST00000543323 NEBP20929 6669 aa0.25□□□□□ -2.37
MDM2-230ENST00000543323 MT1AP04731 61 aa0.25□□□□□ -2.37
MDM2-230ENST00000543323 KRTAP6-1Q3LI64 71 aa0.25□□□□□ -2.37
MDM2-230ENST00000543323 KRTAP6-2Q3LI66 62 aa0.25□□□□□ -2.37
MDM2-230ENST00000543323 GPR98Q8WXG9 6306 aa0.22□□□□□ -2.37
MDM2-230ENST00000543323 DSTQ03001 7570 aaKnown RBP0.2□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 112.6 ms