RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 NEBP20929 6669 aa2.9□□□□□ -1.95
PRKAB1-207ENST00000542698 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
PRKAB1-207ENST00000542698 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
PRKAB1-207ENST00000542698 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
PRKAB1-207ENST00000542698 KRTAP2-1Q9BYU5 128 aa2.82□□□□□ -1.96
PRKAB1-207ENST00000542698 KRTAP19-6Q3LI70 58 aa2.82□□□□□ -1.96
PRKAB1-207ENST00000542698 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
PRKAB1-207ENST00000542698 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
PRKAB1-207ENST00000542698 USH2AO75445 5202 aa2.79□□□□□ -1.96
PRKAB1-207ENST00000542698 SPRR2FQ96RM1 72 aa2.79□□□□□ -1.96
PRKAB1-207ENST00000542698 KRTAP4-7Q9BYR0 210 aa2.79□□□□□ -1.96
PRKAB1-207ENST00000542698 MT1LQ93083 61 aa2.75□□□□□ -1.97
PRKAB1-207ENST00000542698 MT1GP13640 62 aa2.75□□□□□ -1.97
PRKAB1-207ENST00000542698 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
PRKAB1-207ENST00000542698 MT1EP04732 61 aa2.72□□□□□ -1.97
PRKAB1-207ENST00000542698 LCE5AQ5TCM9 118 aa2.7□□□□□ -1.98
PRKAB1-207ENST00000542698 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
PRKAB1-207ENST00000542698 KRTAP19-7Q3SYF9 63 aa2.69□□□□□ -1.98
PRKAB1-207ENST00000542698 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
PRKAB1-207ENST00000542698 LCE3BQ5TA77 95 aa2.67□□□□□ -1.98
PRKAB1-207ENST00000542698 SYNE1Q8NF91 8797 aaKnown RBP2.66□□□□□ -1.98
PRKAB1-207ENST00000542698 SPRR2EP22531 72 aa2.65□□□□□ -1.98
PRKAB1-207ENST00000542698 SPRR2BP35325 72 aa2.65□□□□□ -1.98
PRKAB1-207ENST00000542698 SPRR2AP35326 72 aa2.65□□□□□ -1.98
PRKAB1-207ENST00000542698 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.98
PRKAB1-207ENST00000542698 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.99
PRKAB1-207ENST00000542698 KMT2DO14686 5537 aa2.65□□□□□ -1.99
PRKAB1-207ENST00000542698 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
PRKAB1-207ENST00000542698 SPRR2DP22532 72 aa2.6□□□□□ -1.99
PRKAB1-207ENST00000542698 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
PRKAB1-207ENST00000542698 LOC100996750A0A140TA64 210 aa2.59□□□□□ -1.99
PRKAB1-207ENST00000542698 MT1MQ8N339 61 aa2.59□□□□□ -2
PRKAB1-207ENST00000542698 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -2
PRKAB1-207ENST00000542698 MACF1Q9UPN3 7388 aaKnown RBP2.57□□□□□ -2
PRKAB1-207ENST00000542698 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
PRKAB1-207ENST00000542698 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2
PRKAB1-207ENST00000542698 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
PRKAB1-207ENST00000542698 LCE1AQ5T7P2 110 aa2.52□□□□□ -2.01
PRKAB1-207ENST00000542698 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
PRKAB1-207ENST00000542698 MT3P25713 68 aa2.42□□□□□ -2.02
PRKAB1-207ENST00000542698 KRTAP4-9Q9BYQ8 210 aa2.4□□□□□ -2.03
PRKAB1-207ENST00000542698 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
PRKAB1-207ENST00000542698 MT1AP04731 61 aa2.37□□□□□ -2.03
PRKAB1-207ENST00000542698 PRM1P04553 51 aa2.37□□□□□ -2.03
PRKAB1-207ENST00000542698 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
PRKAB1-207ENST00000542698 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
PRKAB1-207ENST00000542698 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.03
PRKAB1-207ENST00000542698 MUC12Q9UKN1 5478 aa2.34□□□□□ -2.04
PRKAB1-207ENST00000542698 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
PRKAB1-207ENST00000542698 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
PRKAB1-207ENST00000542698 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
PRKAB1-207ENST00000542698 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
PRKAB1-207ENST00000542698 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
PRKAB1-207ENST00000542698 LCE1DQ5T752 114 aa2.21□□□□□ -2.06
PRKAB1-207ENST00000542698 MT4P47944 62 aa2.18□□□□□ -2.06
PRKAB1-207ENST00000542698 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
PRKAB1-207ENST00000542698 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
PRKAB1-207ENST00000542698 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
PRKAB1-207ENST00000542698 LCE1EQ5T753 118 aa2.13□□□□□ -2.07
PRKAB1-207ENST00000542698 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
PRKAB1-207ENST00000542698 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
PRKAB1-207ENST00000542698 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.08
PRKAB1-207ENST00000542698 KRTAP4-11Q9BYQ6 195 aa2.02□□□□□ -2.09
PRKAB1-207ENST00000542698 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
PRKAB1-207ENST00000542698 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
PRKAB1-207ENST00000542698 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.1
PRKAB1-207ENST00000542698 KRTAP4-2Q9BYR5 136 aa1.84□□□□□ -2.12
PRKAB1-207ENST00000542698 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
PRKAB1-207ENST00000542698 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
PRKAB1-207ENST00000542698 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
PRKAB1-207ENST00000542698 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
PRKAB1-207ENST00000542698 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
PRKAB1-207ENST00000542698 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
PRKAB1-207ENST00000542698 KRTAP5-11Q6L8G4 156 aa1.4□□□□□ -2.19
PRKAB1-207ENST00000542698 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.38□□□□□ -2.19
PRKAB1-207ENST00000542698 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
PRKAB1-207ENST00000542698 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
PRKAB1-207ENST00000542698 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 59.1 ms