RNA–Protein interactions for RNA: ENST00000542630.1

COPS7A-214, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-214ENST00000542630 KRTAP10-12P60413 245 aa4.97□□□□□ -1.61
COPS7A-214ENST00000542630 KRTAP13-4Q3LI77 160 aa4.8□□□□□ -1.64
COPS7A-214ENST00000542630 KRTAP4-12Q9BQ66 201 aa4.8□□□□□ -1.64
COPS7A-214ENST00000542630 KRTAP4-9Q9BYQ8 210 aa4.77□□□□□ -1.65
COPS7A-214ENST00000542630 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
COPS7A-214ENST00000542630 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
COPS7A-214ENST00000542630 A0A0D9SG42 100 aa4.74□□□□□ -1.65
COPS7A-214ENST00000542630 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
COPS7A-214ENST00000542630 KRTAP12-1P59990 96 aa4.73□□□□□ -1.65
COPS7A-214ENST00000542630 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
COPS7A-214ENST00000542630 GPR98Q8WXG9 6306 aa4.72□□□□□ -1.65
COPS7A-214ENST00000542630 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
COPS7A-214ENST00000542630 CAMK2N1Q7Z7J9 78 aa4.7□□□□□ -1.66
COPS7A-214ENST00000542630 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
COPS7A-214ENST00000542630 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
COPS7A-214ENST00000542630 MT1EP04732 61 aa4.65□□□□□ -1.67
COPS7A-214ENST00000542630 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
COPS7A-214ENST00000542630 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
COPS7A-214ENST00000542630 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
COPS7A-214ENST00000542630 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
COPS7A-214ENST00000542630 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
COPS7A-214ENST00000542630 C10orf95Q9H7T3 257 aa4.58□□□□□ -1.68
COPS7A-214ENST00000542630 MT1GP13640 62 aa4.57□□□□□ -1.68
COPS7A-214ENST00000542630 MT4P47944 62 aa4.56□□□□□ -1.68
COPS7A-214ENST00000542630 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
COPS7A-214ENST00000542630 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
COPS7A-214ENST00000542630 KRTAP19-5Q3LI72 72 aa4.5□□□□□ -1.69
COPS7A-214ENST00000542630 MT1MQ8N339 61 aa4.45□□□□□ -1.7
COPS7A-214ENST00000542630 HMCN1Q96RW7 5635 aa4.42□□□□□ -1.7
COPS7A-214ENST00000542630 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
COPS7A-214ENST00000542630 MT1LQ93083 61 aa4.4□□□□□ -1.71
COPS7A-214ENST00000542630 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
COPS7A-214ENST00000542630 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
COPS7A-214ENST00000542630 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
COPS7A-214ENST00000542630 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
COPS7A-214ENST00000542630 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
COPS7A-214ENST00000542630 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
COPS7A-214ENST00000542630 TNP1P09430 55 aa4.27□□□□□ -1.73
COPS7A-214ENST00000542630 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
COPS7A-214ENST00000542630 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
COPS7A-214ENST00000542630 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
COPS7A-214ENST00000542630 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
COPS7A-214ENST00000542630 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
COPS7A-214ENST00000542630 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
COPS7A-214ENST00000542630 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
COPS7A-214ENST00000542630 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
COPS7A-214ENST00000542630 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
COPS7A-214ENST00000542630 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
COPS7A-214ENST00000542630 INE1O15225 51 aa3.95□□□□□ -1.78
COPS7A-214ENST00000542630 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
COPS7A-214ENST00000542630 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
COPS7A-214ENST00000542630 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
COPS7A-214ENST00000542630 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
COPS7A-214ENST00000542630 MT1AP04731 61 aa3.75□□□□□ -1.81
COPS7A-214ENST00000542630 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
COPS7A-214ENST00000542630 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
COPS7A-214ENST00000542630 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
COPS7A-214ENST00000542630 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
COPS7A-214ENST00000542630 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
COPS7A-214ENST00000542630 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
COPS7A-214ENST00000542630 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
COPS7A-214ENST00000542630 MT3P25713 68 aa3.48□□□□□ -1.85
COPS7A-214ENST00000542630 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
COPS7A-214ENST00000542630 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
COPS7A-214ENST00000542630 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
COPS7A-214ENST00000542630 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
COPS7A-214ENST00000542630 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
COPS7A-214ENST00000542630 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
COPS7A-214ENST00000542630 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
COPS7A-214ENST00000542630 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
COPS7A-214ENST00000542630 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
COPS7A-214ENST00000542630 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
COPS7A-214ENST00000542630 PRM1P04553 51 aa2.59□□□□□ -1.99
COPS7A-214ENST00000542630 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
COPS7A-214ENST00000542630 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
COPS7A-214ENST00000542630 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
COPS7A-214ENST00000542630 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
COPS7A-214ENST00000542630 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 118.4 ms