RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
SCG3-202ENST00000542355 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
SCG3-202ENST00000542355 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
SCG3-202ENST00000542355 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
SCG3-202ENST00000542355 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
SCG3-202ENST00000542355 MT3P25713 68 aa4.31□□□□□ -1.72
SCG3-202ENST00000542355 KMT2DO14686 5537 aa4.25□□□□□ -1.73
SCG3-202ENST00000542355 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
SCG3-202ENST00000542355 INE1O15225 51 aa4.2□□□□□ -1.74
SCG3-202ENST00000542355 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
SCG3-202ENST00000542355 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
SCG3-202ENST00000542355 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
SCG3-202ENST00000542355 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.75
SCG3-202ENST00000542355 KRTAP19-5Q3LI72 72 aa4.13□□□□□ -1.75
SCG3-202ENST00000542355 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
SCG3-202ENST00000542355 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
SCG3-202ENST00000542355 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
SCG3-202ENST00000542355 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
SCG3-202ENST00000542355 MT1EP04732 61 aa3.98□□□□□ -1.77
SCG3-202ENST00000542355 SPRR2FQ96RM1 72 aa3.91□□□□□ -1.78
SCG3-202ENST00000542355 MT1LQ93083 61 aa3.9□□□□□ -1.78
SCG3-202ENST00000542355 SYNE2Q8WXH0 6885 aaKnown RBP3.9□□□□□ -1.78
SCG3-202ENST00000542355 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
SCG3-202ENST00000542355 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
SCG3-202ENST00000542355 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
SCG3-202ENST00000542355 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
SCG3-202ENST00000542355 MT1GP13640 62 aa3.79□□□□□ -1.8
SCG3-202ENST00000542355 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
SCG3-202ENST00000542355 MT1MQ8N339 61 aa3.75□□□□□ -1.81
SCG3-202ENST00000542355 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
SCG3-202ENST00000542355 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
SCG3-202ENST00000542355 SPRR2EP22531 72 aa3.69□□□□□ -1.82
SCG3-202ENST00000542355 SPRR2BP35325 72 aa3.69□□□□□ -1.82
SCG3-202ENST00000542355 SPRR2AP35326 72 aa3.69□□□□□ -1.82
SCG3-202ENST00000542355 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
SCG3-202ENST00000542355 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
SCG3-202ENST00000542355 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
SCG3-202ENST00000542355 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
SCG3-202ENST00000542355 SPRR2DP22532 72 aa3.55□□□□□ -1.84
SCG3-202ENST00000542355 NEBP20929 6669 aa3.44□□□□□ -1.86
SCG3-202ENST00000542355 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
SCG3-202ENST00000542355 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
SCG3-202ENST00000542355 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
SCG3-202ENST00000542355 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
SCG3-202ENST00000542355 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
SCG3-202ENST00000542355 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.87
SCG3-202ENST00000542355 MT1AP04731 61 aa3.31□□□□□ -1.88
SCG3-202ENST00000542355 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
SCG3-202ENST00000542355 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
SCG3-202ENST00000542355 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
SCG3-202ENST00000542355 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
SCG3-202ENST00000542355 MT4P47944 62 aa3.12□□□□□ -1.91
SCG3-202ENST00000542355 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
SCG3-202ENST00000542355 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
SCG3-202ENST00000542355 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
SCG3-202ENST00000542355 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
SCG3-202ENST00000542355 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
SCG3-202ENST00000542355 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
SCG3-202ENST00000542355 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
SCG3-202ENST00000542355 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
SCG3-202ENST00000542355 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
SCG3-202ENST00000542355 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
SCG3-202ENST00000542355 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
SCG3-202ENST00000542355 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
SCG3-202ENST00000542355 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
SCG3-202ENST00000542355 PRM1P04553 51 aa2.51□□□□□ -2.01
SCG3-202ENST00000542355 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
SCG3-202ENST00000542355 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
SCG3-202ENST00000542355 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
SCG3-202ENST00000542355 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
SCG3-202ENST00000542355 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
SCG3-202ENST00000542355 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
SCG3-202ENST00000542355 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
SCG3-202ENST00000542355 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
SCG3-202ENST00000542355 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
SCG3-202ENST00000542355 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
SCG3-202ENST00000542355 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 149.7 ms