RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 MT1AP04731 61 aa4.05□□□□□ -1.76
TRPM1-203ENST00000542188 LCE5AQ5TCM9 118 aa4.03□□□□□ -1.76
TRPM1-203ENST00000542188 PCLOQ9Y6V0 5065 aa4□□□□□ -1.77
TRPM1-203ENST00000542188 KRTAP2-3P0C7H8 128 aa3.97□□□□□ -1.77
TRPM1-203ENST00000542188 KRTAP2-4Q9BYR9 128 aa3.97□□□□□ -1.77
TRPM1-203ENST00000542188 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
TRPM1-203ENST00000542188 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
TRPM1-203ENST00000542188 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
TRPM1-203ENST00000542188 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
TRPM1-203ENST00000542188 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
TRPM1-203ENST00000542188 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
TRPM1-203ENST00000542188 KRTAP19-7Q3SYF9 63 aa3.85□□□□□ -1.79
TRPM1-203ENST00000542188 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
TRPM1-203ENST00000542188 ABCA13Q86UQ4 5058 aa3.79□□□□□ -1.8
TRPM1-203ENST00000542188 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
TRPM1-203ENST00000542188 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
TRPM1-203ENST00000542188 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
TRPM1-203ENST00000542188 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
TRPM1-203ENST00000542188 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
TRPM1-203ENST00000542188 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
TRPM1-203ENST00000542188 UBR4Q5T4S7 5183 aa3.73□□□□□ -1.81
TRPM1-203ENST00000542188 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
TRPM1-203ENST00000542188 EPPK1P58107 5090 aaKnown RBP3.71□□□□□ -1.82
TRPM1-203ENST00000542188 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
TRPM1-203ENST00000542188 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.82
TRPM1-203ENST00000542188 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
TRPM1-203ENST00000542188 RNF213Q63HN8 5207 aa3.62□□□□□ -1.83
TRPM1-203ENST00000542188 KRTAP9-2Q9BYQ4 174 aa3.61□□□□□ -1.83
TRPM1-203ENST00000542188 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
TRPM1-203ENST00000542188 KRTAP9-7A8MTY7 169 aa3.6□□□□□ -1.83
TRPM1-203ENST00000542188 FSIP2Q5CZC0 6907 aa3.6□□□□□ -1.83
TRPM1-203ENST00000542188 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
TRPM1-203ENST00000542188 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
TRPM1-203ENST00000542188 LCE2AQ5TA79 106 aaPredicted RBP3.5□□□□□ -1.85
TRPM1-203ENST00000542188 MUC2Q02817 5179 aa3.49□□□□□ -1.85
TRPM1-203ENST00000542188 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
TRPM1-203ENST00000542188 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
TRPM1-203ENST00000542188 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
TRPM1-203ENST00000542188 FCGBPQ9Y6R7 5405 aaPredicted RBP3.3□□□□□ -1.88
TRPM1-203ENST00000542188 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
TRPM1-203ENST00000542188 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
TRPM1-203ENST00000542188 KMT2DO14686 5537 aa3.26□□□□□ -1.89
TRPM1-203ENST00000542188 USH2AO75445 5202 aa3.2□□□□□ -1.9
TRPM1-203ENST00000542188 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
TRPM1-203ENST00000542188 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.09□□□□□ -1.91
TRPM1-203ENST00000542188 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
TRPM1-203ENST00000542188 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
TRPM1-203ENST00000542188 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
TRPM1-203ENST00000542188 MUC12Q9UKN1 5478 aa2.89□□□□□ -1.95
TRPM1-203ENST00000542188 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
TRPM1-203ENST00000542188 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
TRPM1-203ENST00000542188 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
TRPM1-203ENST00000542188 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
TRPM1-203ENST00000542188 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
TRPM1-203ENST00000542188 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
TRPM1-203ENST00000542188 KRTAP5-9P26371 169 aa2.71□□□□□ -1.98
TRPM1-203ENST00000542188 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
TRPM1-203ENST00000542188 NEBP20929 6669 aa2.57□□□□□ -2
TRPM1-203ENST00000542188 MDN1Q9NU22 5596 aa2.5□□□□□ -2.01
TRPM1-203ENST00000542188 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
TRPM1-203ENST00000542188 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
TRPM1-203ENST00000542188 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
TRPM1-203ENST00000542188 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
TRPM1-203ENST00000542188 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
TRPM1-203ENST00000542188 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
TRPM1-203ENST00000542188 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
TRPM1-203ENST00000542188 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
TRPM1-203ENST00000542188 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.11
TRPM1-203ENST00000542188 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
TRPM1-203ENST00000542188 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
TRPM1-203ENST00000542188 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
TRPM1-203ENST00000542188 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
TRPM1-203ENST00000542188 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
TRPM1-203ENST00000542188 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
TRPM1-203ENST00000542188 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
TRPM1-203ENST00000542188 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
TRPM1-203ENST00000542188 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 72.1 ms