RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
AC005840.3-201ENST00000541888 LUZP6Q538Z0 58 aa3.42□□□□□ -1.86
AC005840.3-201ENST00000541888 PLAC4Q8WY50 150 aa3.39□□□□□ -1.87
AC005840.3-201ENST00000541888 SPRR2GQ9BYE4 73 aa3.37□□□□□ -1.87
AC005840.3-201ENST00000541888 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
AC005840.3-201ENST00000541888 MT1BP07438 61 aa3.32□□□□□ -1.88
AC005840.3-201ENST00000541888 KRTAP19-8Q3LI54 63 aa3.28□□□□□ -1.88
AC005840.3-201ENST00000541888 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
AC005840.3-201ENST00000541888 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
AC005840.3-201ENST00000541888 CAMK2N1Q7Z7J9 78 aa3.27□□□□□ -1.89
AC005840.3-201ENST00000541888 SSPOA2VEC9 5147 aa3.26□□□□□ -1.89
AC005840.3-201ENST00000541888 MT1XP80297 61 aa3.21□□□□□ -1.9
AC005840.3-201ENST00000541888 KMT2DO14686 5537 aa3.2□□□□□ -1.9
AC005840.3-201ENST00000541888 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
AC005840.3-201ENST00000541888 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
AC005840.3-201ENST00000541888 FCGBPQ9Y6R7 5405 aaPredicted RBP3.14□□□□□ -1.91
AC005840.3-201ENST00000541888 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
AC005840.3-201ENST00000541888 TNP1P09430 55 aa3.1□□□□□ -1.91
AC005840.3-201ENST00000541888 PRO2289Q9P1D8 64 aa3.09□□□□□ -1.91
AC005840.3-201ENST00000541888 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
AC005840.3-201ENST00000541888 INE1O15225 51 aa3.05□□□□□ -1.92
AC005840.3-201ENST00000541888 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
AC005840.3-201ENST00000541888 LCE3AQ5TA76 89 aa3.03□□□□□ -1.93
AC005840.3-201ENST00000541888 CRCT1Q9UGL9 99 aa3.03□□□□□ -1.93
AC005840.3-201ENST00000541888 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
AC005840.3-201ENST00000541888 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
AC005840.3-201ENST00000541888 MUC12Q9UKN1 5478 aa2.93□□□□□ -1.94
AC005840.3-201ENST00000541888 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
AC005840.3-201ENST00000541888 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
AC005840.3-201ENST00000541888 KRTAP8-1Q8IUC2 63 aa2.88□□□□□ -1.95
AC005840.3-201ENST00000541888 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
AC005840.3-201ENST00000541888 KRTAP19-7Q3SYF9 63 aa2.86□□□□□ -1.95
AC005840.3-201ENST00000541888 MDN1Q9NU22 5596 aa2.84□□□□□ -1.95
AC005840.3-201ENST00000541888 SPRR2FQ96RM1 72 aa2.82□□□□□ -1.96
AC005840.3-201ENST00000541888 MT1EP04732 61 aa2.79□□□□□ -1.96
AC005840.3-201ENST00000541888 DSTQ03001 7570 aaKnown RBP2.77□□□□□ -1.97
AC005840.3-201ENST00000541888 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
AC005840.3-201ENST00000541888 MT1LQ93083 61 aa2.73□□□□□ -1.97
AC005840.3-201ENST00000541888 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
AC005840.3-201ENST00000541888 KRTAP19-3Q7Z4W3 81 aa2.68□□□□□ -1.98
AC005840.3-201ENST00000541888 SPRR2EP22531 72 aa2.67□□□□□ -1.98
AC005840.3-201ENST00000541888 SPRR2BP35325 72 aa2.67□□□□□ -1.98
AC005840.3-201ENST00000541888 SPRR2AP35326 72 aa2.67□□□□□ -1.98
AC005840.3-201ENST00000541888 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
AC005840.3-201ENST00000541888 MT1MQ8N339 61 aa2.64□□□□□ -1.99
AC005840.3-201ENST00000541888 MT1GP13640 62 aa2.61□□□□□ -1.99
AC005840.3-201ENST00000541888 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
AC005840.3-201ENST00000541888 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
AC005840.3-201ENST00000541888 NEBP20929 6669 aa2.58□□□□□ -2
AC005840.3-201ENST00000541888 SPRR2DP22532 72 aa2.56□□□□□ -2
AC005840.3-201ENST00000541888 KRTAP2-3P0C7H8 128 aa2.54□□□□□ -2
AC005840.3-201ENST00000541888 KRTAP2-4Q9BYR9 128 aa2.54□□□□□ -2
AC005840.3-201ENST00000541888 KRTAP2-1Q9BYU5 128 aa2.54□□□□□ -2
AC005840.3-201ENST00000541888 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
AC005840.3-201ENST00000541888 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
AC005840.3-201ENST00000541888 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.03
AC005840.3-201ENST00000541888 KRTAP6-1Q3LI64 71 aa2.35□□□□□ -2.03
AC005840.3-201ENST00000541888 KRTAP20-1Q3LI63 56 aa2.34□□□□□ -2.03
AC005840.3-201ENST00000541888 MT4P47944 62 aa2.29□□□□□ -2.04
AC005840.3-201ENST00000541888 MT1AP04731 61 aa2.28□□□□□ -2.04
AC005840.3-201ENST00000541888 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
AC005840.3-201ENST00000541888 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
AC005840.3-201ENST00000541888 KRTAP6-2Q3LI66 62 aa2.17□□□□□ -2.06
AC005840.3-201ENST00000541888 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
AC005840.3-201ENST00000541888 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
AC005840.3-201ENST00000541888 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
AC005840.3-201ENST00000541888 PRM1P04553 51 aa2.01□□□□□ -2.09
AC005840.3-201ENST00000541888 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
AC005840.3-201ENST00000541888 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
AC005840.3-201ENST00000541888 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
AC005840.3-201ENST00000541888 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
AC005840.3-201ENST00000541888 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
AC005840.3-201ENST00000541888 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
AC005840.3-201ENST00000541888 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
AC005840.3-201ENST00000541888 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
AC005840.3-201ENST00000541888 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
AC005840.3-201ENST00000541888 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 85 ms