RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 TNXBP22105 4242 aa3.51□□□□□ -1.85
POLR1B-217ENST00000541869 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
POLR1B-217ENST00000541869 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
POLR1B-217ENST00000541869 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
POLR1B-217ENST00000541869 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
POLR1B-217ENST00000541869 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
POLR1B-217ENST00000541869 MUC17Q685J3 4493 aa3.48□□□□□ -1.85
POLR1B-217ENST00000541869 FAT4Q6V0I7 4981 aa3.46□□□□□ -1.85
POLR1B-217ENST00000541869 FLGP20930 4061 aaPredicted RBP3.46□□□□□ -1.86
POLR1B-217ENST00000541869 MT1EP04732 61 aa3.44□□□□□ -1.86
POLR1B-217ENST00000541869 MT1LQ93083 61 aa3.42□□□□□ -1.86
POLR1B-217ENST00000541869 HMCN2Q8NDA2 5059 aa3.39□□□□□ -1.87
POLR1B-217ENST00000541869 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
POLR1B-217ENST00000541869 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
POLR1B-217ENST00000541869 MT3P25713 68 aa3.36□□□□□ -1.87
POLR1B-217ENST00000541869 LCE1AQ5T7P2 110 aa3.36□□□□□ -1.87
POLR1B-217ENST00000541869 MT1MQ8N339 61 aa3.34□□□□□ -1.87
POLR1B-217ENST00000541869 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
POLR1B-217ENST00000541869 MUC2Q02817 5179 aa3.3□□□□□ -1.88
POLR1B-217ENST00000541869 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
POLR1B-217ENST00000541869 MACF1Q9UPN3 7388 aaKnown RBP3.23□□□□□ -1.89
POLR1B-217ENST00000541869 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
POLR1B-217ENST00000541869 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
POLR1B-217ENST00000541869 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
POLR1B-217ENST00000541869 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
POLR1B-217ENST00000541869 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
POLR1B-217ENST00000541869 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
POLR1B-217ENST00000541869 LCE5AQ5TCM9 118 aa3.13□□□□□ -1.91
POLR1B-217ENST00000541869 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
POLR1B-217ENST00000541869 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
POLR1B-217ENST00000541869 MT1AP04731 61 aa3.1□□□□□ -1.91
POLR1B-217ENST00000541869 LOC100996750A0A140TA64 210 aa3.08□□□□□ -1.92
POLR1B-217ENST00000541869 NEBP20929 6669 aa3.02□□□□□ -1.93
POLR1B-217ENST00000541869 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
POLR1B-217ENST00000541869 KMT2DO14686 5537 aa2.94□□□□□ -1.94
POLR1B-217ENST00000541869 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
POLR1B-217ENST00000541869 USH2AO75445 5202 aa2.91□□□□□ -1.94
POLR1B-217ENST00000541869 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
POLR1B-217ENST00000541869 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
POLR1B-217ENST00000541869 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
POLR1B-217ENST00000541869 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
POLR1B-217ENST00000541869 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
POLR1B-217ENST00000541869 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
POLR1B-217ENST00000541869 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
POLR1B-217ENST00000541869 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
POLR1B-217ENST00000541869 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
POLR1B-217ENST00000541869 SSPOA2VEC9 5147 aa2.81□□□□□ -1.96
POLR1B-217ENST00000541869 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
POLR1B-217ENST00000541869 PRM1P04553 51 aa2.73□□□□□ -1.97
POLR1B-217ENST00000541869 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
POLR1B-217ENST00000541869 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
POLR1B-217ENST00000541869 KRTAP4-6Q9BYQ5 205 aa2.56□□□□□ -2
POLR1B-217ENST00000541869 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
POLR1B-217ENST00000541869 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
POLR1B-217ENST00000541869 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
POLR1B-217ENST00000541869 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
POLR1B-217ENST00000541869 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
POLR1B-217ENST00000541869 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
POLR1B-217ENST00000541869 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
POLR1B-217ENST00000541869 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
POLR1B-217ENST00000541869 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
POLR1B-217ENST00000541869 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
POLR1B-217ENST00000541869 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
POLR1B-217ENST00000541869 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
POLR1B-217ENST00000541869 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
POLR1B-217ENST00000541869 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
POLR1B-217ENST00000541869 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
POLR1B-217ENST00000541869 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
POLR1B-217ENST00000541869 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
POLR1B-217ENST00000541869 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
POLR1B-217ENST00000541869 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
POLR1B-217ENST00000541869 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
POLR1B-217ENST00000541869 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
POLR1B-217ENST00000541869 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.49□□□□□ -2.17
POLR1B-217ENST00000541869 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
POLR1B-217ENST00000541869 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
POLR1B-217ENST00000541869 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 1757.3 ms