RNA–Protein interactions for RNA: ENST00000541225.5

ABCA8-204, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 2

Gene ABCA8, Length 3,657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-204ENST00000541225 FAM208BQ5VWN6 2430 aa1.86□□□□□ -2.11
ABCA8-204ENST00000541225 LCE3AQ5TA76 89 aa1.84□□□□□ -2.12
ABCA8-204ENST00000541225 MT1BP07438 61 aa1.84□□□□□ -2.12
ABCA8-204ENST00000541225 KRTAP9-6A8MVA2 160 aa1.82□□□□□ -2.12
ABCA8-204ENST00000541225 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
ABCA8-204ENST00000541225 KRTAP9-8Q9BYQ0 159 aa1.82□□□□□ -2.12
ABCA8-204ENST00000541225 MUC2Q02817 5179 aa1.79□□□□□ -2.12
ABCA8-204ENST00000541225 KIAA1109Q2LD37 5005 aa1.79□□□□□ -2.12
ABCA8-204ENST00000541225 CRCT1Q9UGL9 99 aa1.77□□□□□ -2.13
ABCA8-204ENST00000541225 LCE3CQ5T5A8 94 aa1.77□□□□□ -2.13
ABCA8-204ENST00000541225 SSPOA2VEC9 5147 aa1.76□□□□□ -2.13
ABCA8-204ENST00000541225 MT1EP04732 61 aa1.73□□□□□ -2.13
ABCA8-204ENST00000541225 MT2AP02795 61 aa1.71□□□□□ -2.14
ABCA8-204ENST00000541225 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
ABCA8-204ENST00000541225 MT1FP04733 61 aa1.71□□□□□ -2.14
ABCA8-204ENST00000541225 KRTAP19-7Q3SYF9 63 aa1.7□□□□□ -2.14
ABCA8-204ENST00000541225 MT1HP80294 61 aa1.7□□□□□ -2.14
ABCA8-204ENST00000541225 USH2AO75445 5202 aa1.68□□□□□ -2.14
ABCA8-204ENST00000541225 RNF213Q63HN8 5207 aa1.68□□□□□ -2.14
ABCA8-204ENST00000541225 MT1AP04731 61 aa1.67□□□□□ -2.14
ABCA8-204ENST00000541225 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.15
ABCA8-204ENST00000541225 DMBT1Q9UGM3 2413 aaPredicted RBP1.64□□□□□ -2.15
ABCA8-204ENST00000541225 NEBP20929 6669 aa1.64□□□□□ -2.15
ABCA8-204ENST00000541225 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
ABCA8-204ENST00000541225 MT1LQ93083 61 aa1.6□□□□□ -2.15
ABCA8-204ENST00000541225 LCE1AQ5T7P2 110 aa1.59□□□□□ -2.15
ABCA8-204ENST00000541225 LCE1FQ5T754 118 aa1.58□□□□□ -2.16
ABCA8-204ENST00000541225 KRTAP4-4Q9BYR3 166 aa1.53□□□□□ -2.16
ABCA8-204ENST00000541225 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
ABCA8-204ENST00000541225 LCE1EQ5T753 118 aa1.53□□□□□ -2.17
ABCA8-204ENST00000541225 OBSCNQ5VST9 7968 aa1.47□□□□□ -2.17
ABCA8-204ENST00000541225 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
ABCA8-204ENST00000541225 KMT2DO14686 5537 aa1.45□□□□□ -2.18
ABCA8-204ENST00000541225 KRTAP5-11Q6L8G4 156 aa1.44□□□□□ -2.18
ABCA8-204ENST00000541225 KRTAP19-6Q3LI70 58 aa1.43□□□□□ -2.18
ABCA8-204ENST00000541225 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
ABCA8-204ENST00000541225 MT1MQ8N339 61 aa1.42□□□□□ -2.18
ABCA8-204ENST00000541225 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
ABCA8-204ENST00000541225 MT3P25713 68 aa1.39□□□□□ -2.19
ABCA8-204ENST00000541225 SPRR2FQ96RM1 72 aa1.38□□□□□ -2.19
ABCA8-204ENST00000541225 MT1GP13640 62 aa1.37□□□□□ -2.19
ABCA8-204ENST00000541225 MACF1Q9UPN3 7388 aaKnown RBP1.37□□□□□ -2.19
ABCA8-204ENST00000541225 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
ABCA8-204ENST00000541225 KRTAP20-1Q3LI63 56 aa1.36□□□□□ -2.19
ABCA8-204ENST00000541225 LCE3EQ5T5B0 92 aa1.35□□□□□ -2.19
ABCA8-204ENST00000541225 M0R2T5 61 aa1.35□□□□□ -2.19
ABCA8-204ENST00000541225 SPRR2AP35326 72 aa1.31□□□□□ -2.2
ABCA8-204ENST00000541225 MUC12Q9UKN1 5478 aa1.3□□□□□ -2.2
ABCA8-204ENST00000541225 KRTAP6-1Q3LI64 71 aa1.29□□□□□ -2.2
ABCA8-204ENST00000541225 KRTAP5-1Q6L8H4 278 aa1.29□□□□□ -2.2
ABCA8-204ENST00000541225 KRTAP5-9P26371 169 aa1.28□□□□□ -2.21
ABCA8-204ENST00000541225 KRTAP5-2Q701N4 177 aa1.27□□□□□ -2.21
ABCA8-204ENST00000541225 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
ABCA8-204ENST00000541225 PRM1P04553 51 aa1.27□□□□□ -2.21
ABCA8-204ENST00000541225 KRTAP4-3Q9BYR4 195 aa1.27□□□□□ -2.21
ABCA8-204ENST00000541225 KRTAP5-4Q6L8H1 288 aa1.26□□□□□ -2.21
ABCA8-204ENST00000541225 KRTAP6-2Q3LI66 62 aa1.26□□□□□ -2.21
ABCA8-204ENST00000541225 SPRR2BP35325 72 aa1.25□□□□□ -2.21
ABCA8-204ENST00000541225 SPRR2EP22531 72 aa1.23□□□□□ -2.21
ABCA8-204ENST00000541225 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
ABCA8-204ENST00000541225 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
ABCA8-204ENST00000541225 FCGBPQ9Y6R7 5405 aaPredicted RBP1.2□□□□□ -2.22
ABCA8-204ENST00000541225 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
ABCA8-204ENST00000541225 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
ABCA8-204ENST00000541225 SPRR2DP22532 72 aa1.13□□□□□ -2.23
ABCA8-204ENST00000541225 SYNE2Q8WXH0 6885 aaKnown RBP1.12□□□□□ -2.23
ABCA8-204ENST00000541225 LCE1CQ5T751 118 aa1.03□□□□□ -2.25
ABCA8-204ENST00000541225 LCE1BQ5T7P3 118 aa1.03□□□□□ -2.25
ABCA8-204ENST00000541225 FSIP2Q5CZC0 6907 aa1□□□□□ -2.25
ABCA8-204ENST00000541225 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
ABCA8-204ENST00000541225 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
ABCA8-204ENST00000541225 KRTAP5-8O75690 187 aa0.97□□□□□ -2.25
ABCA8-204ENST00000541225 KRTAP20-2Q3LI61 65 aa0.92□□□□□ -2.26
ABCA8-204ENST00000541225 DSTQ03001 7570 aaKnown RBP0.92□□□□□ -2.26
ABCA8-204ENST00000541225 MUC19Q7Z5P9 8384 aa0.89□□□□□ -2.27
ABCA8-204ENST00000541225 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
ABCA8-204ENST00000541225 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
ABCA8-204ENST00000541225 MT4P47944 62 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 14 ms