RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 KRTAP19-8Q3LI54 63 aa2.88□□□□□ -1.95
CLTCL1-206ENST00000540896 KRTAP12-1P59990 96 aa2.87□□□□□ -1.95
CLTCL1-206ENST00000540896 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
CLTCL1-206ENST00000540896 FCGBPQ9Y6R7 5405 aaPredicted RBP2.87□□□□□ -1.95
CLTCL1-206ENST00000540896 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
CLTCL1-206ENST00000540896 MT1BP07438 61 aa2.84□□□□□ -1.95
CLTCL1-206ENST00000540896 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
CLTCL1-206ENST00000540896 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
CLTCL1-206ENST00000540896 PRO0628Q9UI54 55 aa2.79□□□□□ -1.96
CLTCL1-206ENST00000540896 PRO2289Q9P1D8 64 aa2.78□□□□□ -1.96
CLTCL1-206ENST00000540896 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
CLTCL1-206ENST00000540896 MACF1Q9UPN3 7388 aaKnown RBP2.75□□□□□ -1.97
CLTCL1-206ENST00000540896 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
CLTCL1-206ENST00000540896 ROMO1P60602 79 aa2.74□□□□□ -1.97
CLTCL1-206ENST00000540896 MT1XP80297 61 aa2.74□□□□□ -1.97
CLTCL1-206ENST00000540896 C10orf95Q9H7T3 257 aa2.73□□□□□ -1.97
CLTCL1-206ENST00000540896 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
CLTCL1-206ENST00000540896 TNP1P09430 55 aa2.7□□□□□ -1.98
CLTCL1-206ENST00000540896 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
CLTCL1-206ENST00000540896 KRTAP25-1Q3LHN0 102 aa2.67□□□□□ -1.98
CLTCL1-206ENST00000540896 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
CLTCL1-206ENST00000540896 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
CLTCL1-206ENST00000540896 NEBP20929 6669 aa2.61□□□□□ -1.99
CLTCL1-206ENST00000540896 KTN1-AS1Q86SY8 53 aa2.6□□□□□ -1.99
CLTCL1-206ENST00000540896 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
CLTCL1-206ENST00000540896 KMT2DO14686 5537 aa2.56□□□□□ -2
CLTCL1-206ENST00000540896 PP632Q6XCG6 107 aa2.56□□□□□ -2
CLTCL1-206ENST00000540896 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
CLTCL1-206ENST00000540896 KRTAP8-1Q8IUC2 63 aa2.54□□□□□ -2
CLTCL1-206ENST00000540896 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
CLTCL1-206ENST00000540896 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
CLTCL1-206ENST00000540896 SPRR2FQ96RM1 72 aa2.49□□□□□ -2.01
CLTCL1-206ENST00000540896 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
CLTCL1-206ENST00000540896 KRTAP19-5Q3LI72 72 aa2.48□□□□□ -2.01
CLTCL1-206ENST00000540896 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
CLTCL1-206ENST00000540896 KRTAP19-7Q3SYF9 63 aa2.43□□□□□ -2.02
CLTCL1-206ENST00000540896 MT1EP04732 61 aa2.42□□□□□ -2.02
CLTCL1-206ENST00000540896 SPRR2EP22531 72 aa2.41□□□□□ -2.02
CLTCL1-206ENST00000540896 SPRR2BP35325 72 aa2.41□□□□□ -2.02
CLTCL1-206ENST00000540896 SPRR2AP35326 72 aa2.41□□□□□ -2.02
CLTCL1-206ENST00000540896 KRTAP2-3P0C7H8 128 aa2.39□□□□□ -2.03
CLTCL1-206ENST00000540896 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
CLTCL1-206ENST00000540896 KRTAP2-4Q9BYR9 128 aa2.39□□□□□ -2.03
CLTCL1-206ENST00000540896 MT1LQ93083 61 aa2.36□□□□□ -2.03
CLTCL1-206ENST00000540896 LUZP6Q538Z0 58 aa2.34□□□□□ -2.03
CLTCL1-206ENST00000540896 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
CLTCL1-206ENST00000540896 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
CLTCL1-206ENST00000540896 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.03
CLTCL1-206ENST00000540896 MT1GP13640 62 aa2.33□□□□□ -2.04
CLTCL1-206ENST00000540896 SPRR2DP22532 72 aa2.33□□□□□ -2.04
CLTCL1-206ENST00000540896 KRTAP2-1Q9BYU5 128 aa2.3□□□□□ -2.04
CLTCL1-206ENST00000540896 MT1MQ8N339 61 aa2.28□□□□□ -2.04
CLTCL1-206ENST00000540896 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
CLTCL1-206ENST00000540896 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
CLTCL1-206ENST00000540896 SPRR5A0A1B0GTR4 108 aa2.18□□□□□ -2.06
CLTCL1-206ENST00000540896 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
CLTCL1-206ENST00000540896 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.07
CLTCL1-206ENST00000540896 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
CLTCL1-206ENST00000540896 MT4P47944 62 aa2.04□□□□□ -2.08
CLTCL1-206ENST00000540896 MT1AP04731 61 aa2.01□□□□□ -2.09
CLTCL1-206ENST00000540896 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
CLTCL1-206ENST00000540896 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
CLTCL1-206ENST00000540896 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
CLTCL1-206ENST00000540896 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
CLTCL1-206ENST00000540896 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
CLTCL1-206ENST00000540896 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
CLTCL1-206ENST00000540896 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
CLTCL1-206ENST00000540896 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
CLTCL1-206ENST00000540896 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
CLTCL1-206ENST00000540896 INE1O15225 51 aa1.78□□□□□ -2.12
CLTCL1-206ENST00000540896 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
CLTCL1-206ENST00000540896 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
CLTCL1-206ENST00000540896 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
CLTCL1-206ENST00000540896 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
CLTCL1-206ENST00000540896 PRM1P04553 51 aa1.41□□□□□ -2.18
CLTCL1-206ENST00000540896 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
CLTCL1-206ENST00000540896 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
CLTCL1-206ENST00000540896 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 262.3 ms