RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 INE1O15225 51 aa6.99□□□□□ -1.29
LSM14A-202ENST00000540746 KRTAP2-3P0C7H8 128 aa6.98□□□□□ -1.29
LSM14A-202ENST00000540746 KRTAP4-3Q9BYR4 195 aa6.98□□□□□ -1.29
LSM14A-202ENST00000540746 KRTAP2-4Q9BYR9 128 aa6.98□□□□□ -1.29
LSM14A-202ENST00000540746 KRTAP2-1Q9BYU5 128 aa6.98□□□□□ -1.29
LSM14A-202ENST00000540746 KRTAP19-3Q7Z4W3 81 aa6.93□□□□□ -1.3
LSM14A-202ENST00000540746 MT1MQ8N339 61 aa6.9□□□□□ -1.3
LSM14A-202ENST00000540746 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
LSM14A-202ENST00000540746 MT1GP13640 62 aa6.88□□□□□ -1.31
LSM14A-202ENST00000540746 MACF1Q9UPN3 7388 aaKnown RBP6.81□□□□□ -1.32
LSM14A-202ENST00000540746 SPRR2FQ96RM1 72 aa6.78□□□□□ -1.32
LSM14A-202ENST00000540746 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
LSM14A-202ENST00000540746 DSTQ03001 7570 aaKnown RBP6.67□□□□□ -1.34
LSM14A-202ENST00000540746 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.35
LSM14A-202ENST00000540746 SYNE2Q8WXH0 6885 aaKnown RBP6.62□□□□□ -1.35
LSM14A-202ENST00000540746 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
LSM14A-202ENST00000540746 MDN1Q9NU22 5596 aa6.5□□□□□ -1.37
LSM14A-202ENST00000540746 KRTAP5-9P26371 169 aa6.42□□□□□ -1.38
LSM14A-202ENST00000540746 LCE1AQ5T7P2 110 aa6.4□□□□□ -1.39
LSM14A-202ENST00000540746 SPRR2EP22531 72 aa6.23□□□□□ -1.41
LSM14A-202ENST00000540746 SPRR2BP35325 72 aa6.23□□□□□ -1.41
LSM14A-202ENST00000540746 SPRR2AP35326 72 aa6.23□□□□□ -1.41
LSM14A-202ENST00000540746 KRTAP6-1Q3LI64 71 aa6.23□□□□□ -1.41
LSM14A-202ENST00000540746 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
LSM14A-202ENST00000540746 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
LSM14A-202ENST00000540746 MT1AP04731 61 aa6.16□□□□□ -1.42
LSM14A-202ENST00000540746 KRTAP5-5Q701N2 237 aaPredicted RBP6.16□□□□□ -1.42
LSM14A-202ENST00000540746 SYNE1Q8NF91 8797 aaKnown RBP6.09□□□□□ -1.43
LSM14A-202ENST00000540746 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
LSM14A-202ENST00000540746 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
LSM14A-202ENST00000540746 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
LSM14A-202ENST00000540746 SPRR2DP22532 72 aa5.96□□□□□ -1.46
LSM14A-202ENST00000540746 KRTAP6-3Q3LI67 103 aa5.95□□□□□ -1.46
LSM14A-202ENST00000540746 KRTAP9-4Q9BYQ2 154 aa5.82□□□□□ -1.48
LSM14A-202ENST00000540746 LCE3DQ9BYE3 92 aa5.8□□□□□ -1.48
LSM14A-202ENST00000540746 LCE3EQ5T5B0 92 aa5.7□□□□□ -1.5
LSM14A-202ENST00000540746 NEBP20929 6669 aa5.69□□□□□ -1.5
LSM14A-202ENST00000540746 KRTAP6-2Q3LI66 62 aa5.62□□□□□ -1.51
LSM14A-202ENST00000540746 KRTAP5-4Q6L8H1 288 aa5.52□□□□□ -1.53
LSM14A-202ENST00000540746 MT3P25713 68 aa5.52□□□□□ -1.53
LSM14A-202ENST00000540746 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
LSM14A-202ENST00000540746 PRM1P04553 51 aa5.35□□□□□ -1.55
LSM14A-202ENST00000540746 KRTAP4-6Q9BYQ5 205 aa5.33□□□□□ -1.56
LSM14A-202ENST00000540746 MT4P47944 62 aa5.26□□□□□ -1.57
LSM14A-202ENST00000540746 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
LSM14A-202ENST00000540746 KRTAP20-2Q3LI61 65 aa5.18□□□□□ -1.58
LSM14A-202ENST00000540746 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
LSM14A-202ENST00000540746 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
LSM14A-202ENST00000540746 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
LSM14A-202ENST00000540746 KRTAP2-2Q9BYT5 123 aa5.05□□□□□ -1.6
LSM14A-202ENST00000540746 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
LSM14A-202ENST00000540746 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
LSM14A-202ENST00000540746 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
LSM14A-202ENST00000540746 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
LSM14A-202ENST00000540746 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
LSM14A-202ENST00000540746 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
LSM14A-202ENST00000540746 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
LSM14A-202ENST00000540746 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
LSM14A-202ENST00000540746 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
LSM14A-202ENST00000540746 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
LSM14A-202ENST00000540746 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
LSM14A-202ENST00000540746 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
LSM14A-202ENST00000540746 LCE1CQ5T751 118 aa4.34□□□□□ -1.72
LSM14A-202ENST00000540746 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
LSM14A-202ENST00000540746 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
LSM14A-202ENST00000540746 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
LSM14A-202ENST00000540746 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
LSM14A-202ENST00000540746 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
LSM14A-202ENST00000540746 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
LSM14A-202ENST00000540746 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
LSM14A-202ENST00000540746 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
LSM14A-202ENST00000540746 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
LSM14A-202ENST00000540746 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
LSM14A-202ENST00000540746 KRTAP21-1Q3LI58 79 aa3.35□□□□□ -1.87
LSM14A-202ENST00000540746 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
LSM14A-202ENST00000540746 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
LSM14A-202ENST00000540746 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 64.8 ms