RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 KRTAP4-9Q9BYQ8 210 aa6.3□□□□□ -1.4
UBC-208ENST00000540700 KRTAP19-7Q3SYF9 63 aa6.28□□□□□ -1.4
UBC-208ENST00000540700 LCE3AQ5TA76 89 aa6.27□□□□□ -1.41
UBC-208ENST00000540700 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
UBC-208ENST00000540700 MT1EP04732 61 aa6.18□□□□□ -1.42
UBC-208ENST00000540700 KRTAP25-1Q3LHN0 102 aa6.18□□□□□ -1.42
UBC-208ENST00000540700 ROMO1P60602 79 aa6.13□□□□□ -1.43
UBC-208ENST00000540700 BRK1Q8WUW1 75 aa6.13□□□□□ -1.43
UBC-208ENST00000540700 HMCN1Q96RW7 5635 aa6.09□□□□□ -1.44
UBC-208ENST00000540700 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
UBC-208ENST00000540700 AHNAK2Q8IVF2 5795 aa6.03□□□□□ -1.44
UBC-208ENST00000540700 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
UBC-208ENST00000540700 LCE5AQ5TCM9 118 aa5.99□□□□□ -1.45
UBC-208ENST00000540700 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
UBC-208ENST00000540700 MT1LQ93083 61 aa5.97□□□□□ -1.45
UBC-208ENST00000540700 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
UBC-208ENST00000540700 MT4P47944 62 aa5.95□□□□□ -1.46
UBC-208ENST00000540700 MT1GP13640 62 aa5.87□□□□□ -1.47
UBC-208ENST00000540700 KRTAP5-10Q6L8G5 202 aa5.87□□□□□ -1.47
UBC-208ENST00000540700 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
UBC-208ENST00000540700 MT1MQ8N339 61 aa5.85□□□□□ -1.47
UBC-208ENST00000540700 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
UBC-208ENST00000540700 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
UBC-208ENST00000540700 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
UBC-208ENST00000540700 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
UBC-208ENST00000540700 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
UBC-208ENST00000540700 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
UBC-208ENST00000540700 PRO0628Q9UI54 55 aa5.7□□□□□ -1.5
UBC-208ENST00000540700 KRTAP5-7Q6L8G8 165 aa5.69□□□□□ -1.5
UBC-208ENST00000540700 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
UBC-208ENST00000540700 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
UBC-208ENST00000540700 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
UBC-208ENST00000540700 PRAC1Q96KF2 57 aa5.57□□□□□ -1.52
UBC-208ENST00000540700 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
UBC-208ENST00000540700 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
UBC-208ENST00000540700 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
UBC-208ENST00000540700 KRTAP20-2Q3LI61 65 aa5.38□□□□□ -1.55
UBC-208ENST00000540700 KTN1-AS1Q86SY8 53 aa5.37□□□□□ -1.55
UBC-208ENST00000540700 KRTAP5-5Q701N2 237 aaPredicted RBP5.35□□□□□ -1.55
UBC-208ENST00000540700 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
UBC-208ENST00000540700 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
UBC-208ENST00000540700 AHNAKQ09666 5890 aaKnown RBP5.18□□□□□ -1.58
UBC-208ENST00000540700 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
UBC-208ENST00000540700 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
UBC-208ENST00000540700 MUC5BQ9HC84 5762 aaPredicted RBP5.07□□□□□ -1.6
UBC-208ENST00000540700 MT1AP04731 61 aa5.06□□□□□ -1.6
UBC-208ENST00000540700 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
UBC-208ENST00000540700 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
UBC-208ENST00000540700 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
UBC-208ENST00000540700 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
UBC-208ENST00000540700 KRTAP5-2Q701N4 177 aa4.83□□□□□ -1.64
UBC-208ENST00000540700 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
UBC-208ENST00000540700 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
UBC-208ENST00000540700 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
UBC-208ENST00000540700 H3BS24 57 aa4.59□□□□□ -1.67
UBC-208ENST00000540700 MT3P25713 68 aa4.57□□□□□ -1.68
UBC-208ENST00000540700 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
UBC-208ENST00000540700 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
UBC-208ENST00000540700 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
UBC-208ENST00000540700 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
UBC-208ENST00000540700 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
UBC-208ENST00000540700 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
UBC-208ENST00000540700 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
UBC-208ENST00000540700 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
UBC-208ENST00000540700 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
UBC-208ENST00000540700 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
UBC-208ENST00000540700 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
UBC-208ENST00000540700 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
UBC-208ENST00000540700 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
UBC-208ENST00000540700 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
UBC-208ENST00000540700 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
UBC-208ENST00000540700 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
UBC-208ENST00000540700 INE1O15225 51 aa3.27□□□□□ -1.89
UBC-208ENST00000540700 PRM1P04553 51 aa3.2□□□□□ -1.9
UBC-208ENST00000540700 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
UBC-208ENST00000540700 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
UBC-208ENST00000540700 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
UBC-208ENST00000540700 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 21.1 ms