RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
TMEM258-205ENST00000540434 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
TMEM258-205ENST00000540434 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
TMEM258-205ENST00000540434 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
TMEM258-205ENST00000540434 UQCR11O14957 56 aa4.2□□□□□ -1.74
TMEM258-205ENST00000540434 PSPHP1O15172 72 aa4.19□□□□□ -1.74
TMEM258-205ENST00000540434 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
TMEM258-205ENST00000540434 Q1T7F1 81 aa4.17□□□□□ -1.74
TMEM258-205ENST00000540434 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
TMEM258-205ENST00000540434 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.75
TMEM258-205ENST00000540434 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
TMEM258-205ENST00000540434 TNP1P09430 55 aa4.12□□□□□ -1.75
TMEM258-205ENST00000540434 RPS28P62857 69 aaKnown RBP4.11□□□□□ -1.75
TMEM258-205ENST00000540434 V9GYY9 64 aa4.09□□□□□ -1.75
TMEM258-205ENST00000540434 MT1LQ93083 61 aa4.06□□□□□ -1.76
TMEM258-205ENST00000540434 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
TMEM258-205ENST00000540434 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
TMEM258-205ENST00000540434 MT1GP13640 62 aa4.04□□□□□ -1.76
TMEM258-205ENST00000540434 MT1MQ8N339 61 aa4.02□□□□□ -1.77
TMEM258-205ENST00000540434 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
TMEM258-205ENST00000540434 A6NED7 52 aa3.99□□□□□ -1.77
TMEM258-205ENST00000540434 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
TMEM258-205ENST00000540434 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
TMEM258-205ENST00000540434 KRTAP12-3P60328 96 aa3.96□□□□□ -1.78
TMEM258-205ENST00000540434 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
TMEM258-205ENST00000540434 K7ERS5 55 aa3.93□□□□□ -1.78
TMEM258-205ENST00000540434 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
TMEM258-205ENST00000540434 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
TMEM258-205ENST00000540434 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
TMEM258-205ENST00000540434 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
TMEM258-205ENST00000540434 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
TMEM258-205ENST00000540434 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
TMEM258-205ENST00000540434 BRK1Q8WUW1 75 aa3.8□□□□□ -1.8
TMEM258-205ENST00000540434 KRTAP23-1A1A580 65 aa3.79□□□□□ -1.8
TMEM258-205ENST00000540434 ROMO1P60602 79 aa3.79□□□□□ -1.8
TMEM258-205ENST00000540434 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
TMEM258-205ENST00000540434 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
TMEM258-205ENST00000540434 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
TMEM258-205ENST00000540434 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
TMEM258-205ENST00000540434 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
TMEM258-205ENST00000540434 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
TMEM258-205ENST00000540434 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
TMEM258-205ENST00000540434 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
TMEM258-205ENST00000540434 H3BS24 57 aa3.64□□□□□ -1.83
TMEM258-205ENST00000540434 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
TMEM258-205ENST00000540434 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
TMEM258-205ENST00000540434 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
TMEM258-205ENST00000540434 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
TMEM258-205ENST00000540434 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
TMEM258-205ENST00000540434 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
TMEM258-205ENST00000540434 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
TMEM258-205ENST00000540434 MT1AP04731 61 aa3.43□□□□□ -1.86
TMEM258-205ENST00000540434 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
TMEM258-205ENST00000540434 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
TMEM258-205ENST00000540434 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
TMEM258-205ENST00000540434 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
TMEM258-205ENST00000540434 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
TMEM258-205ENST00000540434 MT3P25713 68 aa3.1□□□□□ -1.91
TMEM258-205ENST00000540434 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
TMEM258-205ENST00000540434 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
TMEM258-205ENST00000540434 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
TMEM258-205ENST00000540434 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
TMEM258-205ENST00000540434 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
TMEM258-205ENST00000540434 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
TMEM258-205ENST00000540434 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
TMEM258-205ENST00000540434 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
TMEM258-205ENST00000540434 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
TMEM258-205ENST00000540434 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
TMEM258-205ENST00000540434 INE1O15225 51 aa2.54□□□□□ -2
TMEM258-205ENST00000540434 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
TMEM258-205ENST00000540434 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
TMEM258-205ENST00000540434 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
TMEM258-205ENST00000540434 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
TMEM258-205ENST00000540434 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
TMEM258-205ENST00000540434 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
TMEM258-205ENST00000540434 PRM1P04553 51 aa1.99□□□□□ -2.09
TMEM258-205ENST00000540434 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
TMEM258-205ENST00000540434 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 189.7 ms