RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 MACF1Q9UPN3 7388 aaKnown RBP4.76□□□□□ -1.65
CYB561A3-214ENST00000540139 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
CYB561A3-214ENST00000540139 KRTAP10-12P60413 245 aa4.72□□□□□ -1.65
CYB561A3-214ENST00000540139 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
CYB561A3-214ENST00000540139 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
CYB561A3-214ENST00000540139 CDC42SE1Q9NRR8 79 aa4.68□□□□□ -1.66
CYB561A3-214ENST00000540139 SYNE2Q8WXH0 6885 aaKnown RBP4.68□□□□□ -1.66
CYB561A3-214ENST00000540139 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
CYB561A3-214ENST00000540139 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
CYB561A3-214ENST00000540139 TNP1P09430 55 aa4.61□□□□□ -1.67
CYB561A3-214ENST00000540139 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
CYB561A3-214ENST00000540139 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
CYB561A3-214ENST00000540139 KMT2DO14686 5537 aa4.58□□□□□ -1.68
CYB561A3-214ENST00000540139 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
CYB561A3-214ENST00000540139 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
CYB561A3-214ENST00000540139 ROMO1P60602 79 aa4.47□□□□□ -1.69
CYB561A3-214ENST00000540139 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
CYB561A3-214ENST00000540139 KRTAP19-7Q3SYF9 63 aa4.42□□□□□ -1.7
CYB561A3-214ENST00000540139 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
CYB561A3-214ENST00000540139 NEBP20929 6669 aa4.41□□□□□ -1.7
CYB561A3-214ENST00000540139 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
CYB561A3-214ENST00000540139 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
CYB561A3-214ENST00000540139 MT1EP04732 61 aa4.36□□□□□ -1.71
CYB561A3-214ENST00000540139 SPRR2EP22531 72 aa4.35□□□□□ -1.71
CYB561A3-214ENST00000540139 SPRR2BP35325 72 aa4.35□□□□□ -1.71
CYB561A3-214ENST00000540139 SPRR2AP35326 72 aa4.35□□□□□ -1.71
CYB561A3-214ENST00000540139 PP632Q6XCG6 107 aa4.33□□□□□ -1.72
CYB561A3-214ENST00000540139 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
CYB561A3-214ENST00000540139 KRTAP12-3P60328 96 aa4.3□□□□□ -1.72
CYB561A3-214ENST00000540139 KRTAP19-3Q7Z4W3 81 aa4.27□□□□□ -1.73
CYB561A3-214ENST00000540139 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
CYB561A3-214ENST00000540139 MT1GP13640 62 aa4.24□□□□□ -1.73
CYB561A3-214ENST00000540139 MT1LQ93083 61 aa4.22□□□□□ -1.73
CYB561A3-214ENST00000540139 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
CYB561A3-214ENST00000540139 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
CYB561A3-214ENST00000540139 SPRR2DP22532 72 aa4.2□□□□□ -1.74
CYB561A3-214ENST00000540139 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
CYB561A3-214ENST00000540139 MT1MQ8N339 61 aa4.12□□□□□ -1.75
CYB561A3-214ENST00000540139 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
CYB561A3-214ENST00000540139 KRTAP2-1Q9BYU5 128 aa4.08□□□□□ -1.76
CYB561A3-214ENST00000540139 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
CYB561A3-214ENST00000540139 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
CYB561A3-214ENST00000540139 INE1O15225 51 aa3.82□□□□□ -1.8
CYB561A3-214ENST00000540139 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
CYB561A3-214ENST00000540139 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
CYB561A3-214ENST00000540139 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
CYB561A3-214ENST00000540139 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
CYB561A3-214ENST00000540139 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
CYB561A3-214ENST00000540139 MT1AP04731 61 aa3.62□□□□□ -1.83
CYB561A3-214ENST00000540139 MT4P47944 62 aa3.61□□□□□ -1.83
CYB561A3-214ENST00000540139 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
CYB561A3-214ENST00000540139 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
CYB561A3-214ENST00000540139 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
CYB561A3-214ENST00000540139 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
CYB561A3-214ENST00000540139 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
CYB561A3-214ENST00000540139 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
CYB561A3-214ENST00000540139 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
CYB561A3-214ENST00000540139 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
CYB561A3-214ENST00000540139 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
CYB561A3-214ENST00000540139 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
CYB561A3-214ENST00000540139 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
CYB561A3-214ENST00000540139 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
CYB561A3-214ENST00000540139 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
CYB561A3-214ENST00000540139 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
CYB561A3-214ENST00000540139 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
CYB561A3-214ENST00000540139 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
CYB561A3-214ENST00000540139 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
CYB561A3-214ENST00000540139 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
CYB561A3-214ENST00000540139 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.97
CYB561A3-214ENST00000540139 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
CYB561A3-214ENST00000540139 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
CYB561A3-214ENST00000540139 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
CYB561A3-214ENST00000540139 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
CYB561A3-214ENST00000540139 PRM1P04553 51 aa2.26□□□□□ -2.05
CYB561A3-214ENST00000540139 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
CYB561A3-214ENST00000540139 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
CYB561A3-214ENST00000540139 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
CYB561A3-214ENST00000540139 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 76.2 ms