RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
C11orf54-214ENST00000540113 FSIP2Q5CZC0 6907 aa4.16□□□□□ -1.74
C11orf54-214ENST00000540113 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.74
C11orf54-214ENST00000540113 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
C11orf54-214ENST00000540113 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
C11orf54-214ENST00000540113 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
C11orf54-214ENST00000540113 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
C11orf54-214ENST00000540113 MT1EP04732 61 aa4.04□□□□□ -1.76
C11orf54-214ENST00000540113 FCGBPQ9Y6R7 5405 aaPredicted RBP4.02□□□□□ -1.77
C11orf54-214ENST00000540113 MT1LQ93083 61 aa4.02□□□□□ -1.77
C11orf54-214ENST00000540113 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
C11orf54-214ENST00000540113 CRCT1Q9UGL9 99 aa3.99□□□□□ -1.77
C11orf54-214ENST00000540113 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.78
C11orf54-214ENST00000540113 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
C11orf54-214ENST00000540113 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
C11orf54-214ENST00000540113 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
C11orf54-214ENST00000540113 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
C11orf54-214ENST00000540113 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
C11orf54-214ENST00000540113 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
C11orf54-214ENST00000540113 MT1GP13640 62 aa3.8□□□□□ -1.8
C11orf54-214ENST00000540113 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
C11orf54-214ENST00000540113 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
C11orf54-214ENST00000540113 MT1MQ8N339 61 aa3.79□□□□□ -1.8
C11orf54-214ENST00000540113 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
C11orf54-214ENST00000540113 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
C11orf54-214ENST00000540113 MT3P25713 68 aa3.73□□□□□ -1.81
C11orf54-214ENST00000540113 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
C11orf54-214ENST00000540113 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
C11orf54-214ENST00000540113 SYNE2Q8WXH0 6885 aaKnown RBP3.64□□□□□ -1.83
C11orf54-214ENST00000540113 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
C11orf54-214ENST00000540113 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
C11orf54-214ENST00000540113 SPRR2EP22531 72 aa3.56□□□□□ -1.84
C11orf54-214ENST00000540113 SPRR2BP35325 72 aa3.56□□□□□ -1.84
C11orf54-214ENST00000540113 SPRR2AP35326 72 aa3.56□□□□□ -1.84
C11orf54-214ENST00000540113 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
C11orf54-214ENST00000540113 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
C11orf54-214ENST00000540113 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
C11orf54-214ENST00000540113 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
C11orf54-214ENST00000540113 SPRR2DP22532 72 aa3.43□□□□□ -1.86
C11orf54-214ENST00000540113 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
C11orf54-214ENST00000540113 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
C11orf54-214ENST00000540113 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
C11orf54-214ENST00000540113 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
C11orf54-214ENST00000540113 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
C11orf54-214ENST00000540113 MT1AP04731 61 aa3.38□□□□□ -1.87
C11orf54-214ENST00000540113 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
C11orf54-214ENST00000540113 NEBP20929 6669 aa3.33□□□□□ -1.88
C11orf54-214ENST00000540113 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
C11orf54-214ENST00000540113 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
C11orf54-214ENST00000540113 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
C11orf54-214ENST00000540113 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
C11orf54-214ENST00000540113 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
C11orf54-214ENST00000540113 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
C11orf54-214ENST00000540113 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
C11orf54-214ENST00000540113 PRM1P04553 51 aa3.04□□□□□ -1.92
C11orf54-214ENST00000540113 MT4P47944 62 aa2.97□□□□□ -1.93
C11orf54-214ENST00000540113 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
C11orf54-214ENST00000540113 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
C11orf54-214ENST00000540113 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
C11orf54-214ENST00000540113 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
C11orf54-214ENST00000540113 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
C11orf54-214ENST00000540113 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
C11orf54-214ENST00000540113 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
C11orf54-214ENST00000540113 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
C11orf54-214ENST00000540113 MUC5ACP98088 5654 aa2.56□□□□□ -2
C11orf54-214ENST00000540113 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
C11orf54-214ENST00000540113 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
C11orf54-214ENST00000540113 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
C11orf54-214ENST00000540113 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
C11orf54-214ENST00000540113 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
C11orf54-214ENST00000540113 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
C11orf54-214ENST00000540113 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
C11orf54-214ENST00000540113 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
C11orf54-214ENST00000540113 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
C11orf54-214ENST00000540113 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
C11orf54-214ENST00000540113 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
C11orf54-214ENST00000540113 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 162.5 ms