RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 USH2AO75445 5202 aa2.77□□□□□ -1.97
SNHG1-212ENST00000539975 A0A0D9SG42 100 aa2.76□□□□□ -1.97
SNHG1-212ENST00000539975 CAMK2N1Q7Z7J9 78 aa2.76□□□□□ -1.97
SNHG1-212ENST00000539975 UQCR11O14957 56 aa2.75□□□□□ -1.97
SNHG1-212ENST00000539975 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
SNHG1-212ENST00000539975 KRTAP13-4Q3LI77 160 aa2.72□□□□□ -1.97
SNHG1-212ENST00000539975 MIR22HGQ0VDD5 57 aa2.71□□□□□ -1.98
SNHG1-212ENST00000539975 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
SNHG1-212ENST00000539975 K7ERS5 55 aa2.69□□□□□ -1.98
SNHG1-212ENST00000539975 KRTAP25-1Q3LHN0 102 aa2.69□□□□□ -1.98
SNHG1-212ENST00000539975 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
SNHG1-212ENST00000539975 MT1XP80297 61 aa2.67□□□□□ -1.98
SNHG1-212ENST00000539975 KRTAP12-1P59990 96 aa2.65□□□□□ -1.99
SNHG1-212ENST00000539975 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-212ENST00000539975 KRTAP12-2P59991 146 aa2.63□□□□□ -1.99
SNHG1-212ENST00000539975 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
SNHG1-212ENST00000539975 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
SNHG1-212ENST00000539975 KRTAP8-1Q8IUC2 63 aa2.58□□□□□ -2
SNHG1-212ENST00000539975 TNP1P09430 55 aa2.57□□□□□ -2
SNHG1-212ENST00000539975 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
SNHG1-212ENST00000539975 SPRR2FQ96RM1 72 aa2.53□□□□□ -2
SNHG1-212ENST00000539975 MACF1Q9UPN3 7388 aaKnown RBP2.52□□□□□ -2.01
SNHG1-212ENST00000539975 C10orf95Q9H7T3 257 aa2.5□□□□□ -2.01
SNHG1-212ENST00000539975 SYNE2Q8WXH0 6885 aaKnown RBP2.48□□□□□ -2.01
SNHG1-212ENST00000539975 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
SNHG1-212ENST00000539975 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
SNHG1-212ENST00000539975 SPRR2EP22531 72 aa2.46□□□□□ -2.02
SNHG1-212ENST00000539975 SPRR2BP35325 72 aa2.46□□□□□ -2.02
SNHG1-212ENST00000539975 SPRR2AP35326 72 aa2.46□□□□□ -2.02
SNHG1-212ENST00000539975 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
SNHG1-212ENST00000539975 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
SNHG1-212ENST00000539975 KMT2DO14686 5537 aa2.39□□□□□ -2.03
SNHG1-212ENST00000539975 SPRR2DP22532 72 aa2.38□□□□□ -2.03
SNHG1-212ENST00000539975 KRTAP19-7Q3SYF9 63 aa2.37□□□□□ -2.03
SNHG1-212ENST00000539975 PP632Q6XCG6 107 aa2.37□□□□□ -2.03
SNHG1-212ENST00000539975 MT1EP04732 61 aa2.36□□□□□ -2.03
SNHG1-212ENST00000539975 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
SNHG1-212ENST00000539975 KRTAP20-1Q3LI63 56 aa2.36□□□□□ -2.03
SNHG1-212ENST00000539975 KRTAP2-3P0C7H8 128 aa2.35□□□□□ -2.03
SNHG1-212ENST00000539975 KRTAP2-4Q9BYR9 128 aa2.35□□□□□ -2.03
SNHG1-212ENST00000539975 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.03
SNHG1-212ENST00000539975 MT1GP13640 62 aa2.32□□□□□ -2.04
SNHG1-212ENST00000539975 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
SNHG1-212ENST00000539975 MT1LQ93083 61 aa2.29□□□□□ -2.04
SNHG1-212ENST00000539975 MDN1Q9NU22 5596 aa2.29□□□□□ -2.04
SNHG1-212ENST00000539975 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.04
SNHG1-212ENST00000539975 NEBP20929 6669 aa2.28□□□□□ -2.04
SNHG1-212ENST00000539975 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-212ENST00000539975 INE1O15225 51 aa2.25□□□□□ -2.05
SNHG1-212ENST00000539975 MT1MQ8N339 61 aa2.24□□□□□ -2.05
SNHG1-212ENST00000539975 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
SNHG1-212ENST00000539975 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
SNHG1-212ENST00000539975 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
SNHG1-212ENST00000539975 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
SNHG1-212ENST00000539975 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
SNHG1-212ENST00000539975 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
SNHG1-212ENST00000539975 MT4P47944 62 aa2.06□□□□□ -2.08
SNHG1-212ENST00000539975 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
SNHG1-212ENST00000539975 MT1AP04731 61 aa1.96□□□□□ -2.1
SNHG1-212ENST00000539975 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
SNHG1-212ENST00000539975 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
SNHG1-212ENST00000539975 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
SNHG1-212ENST00000539975 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
SNHG1-212ENST00000539975 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
SNHG1-212ENST00000539975 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
SNHG1-212ENST00000539975 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
SNHG1-212ENST00000539975 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
SNHG1-212ENST00000539975 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
SNHG1-212ENST00000539975 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
SNHG1-212ENST00000539975 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
SNHG1-212ENST00000539975 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
SNHG1-212ENST00000539975 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
SNHG1-212ENST00000539975 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
SNHG1-212ENST00000539975 PRM1P04553 51 aa1.27□□□□□ -2.21
SNHG1-212ENST00000539975 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
SNHG1-212ENST00000539975 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
SNHG1-212ENST00000539975 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms