RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 KRTAP5-9P26371 169 aa2.77□□□□□ -1.97
CPSF7-219ENST00000539952 A0A0D9SG42 100 aa2.76□□□□□ -1.97
CPSF7-219ENST00000539952 P0C880 135 aa2.74□□□□□ -1.97
CPSF7-219ENST00000539952 KRTAP13-4Q3LI77 160 aa2.74□□□□□ -1.97
CPSF7-219ENST00000539952 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
CPSF7-219ENST00000539952 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
CPSF7-219ENST00000539952 KRTAP12-2P59991 146 aa2.7□□□□□ -1.98
CPSF7-219ENST00000539952 KRTAP10-5P60370 271 aa2.69□□□□□ -1.98
CPSF7-219ENST00000539952 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
CPSF7-219ENST00000539952 MT1BP07438 61 aa2.68□□□□□ -1.98
CPSF7-219ENST00000539952 KRTAP19-8Q3LI54 63 aa2.67□□□□□ -1.98
CPSF7-219ENST00000539952 C10orf95Q9H7T3 257 aa2.66□□□□□ -1.98
CPSF7-219ENST00000539952 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.99
CPSF7-219ENST00000539952 PP632Q6XCG6 107 aa2.65□□□□□ -1.99
CPSF7-219ENST00000539952 SPRR2GQ9BYE4 73 aa2.65□□□□□ -1.99
CPSF7-219ENST00000539952 R4GN34 69 aa2.65□□□□□ -1.99
CPSF7-219ENST00000539952 SPRR2EP22531 72 aa2.64□□□□□ -1.99
CPSF7-219ENST00000539952 SPRR2BP35325 72 aa2.64□□□□□ -1.99
CPSF7-219ENST00000539952 SPRR2AP35326 72 aa2.64□□□□□ -1.99
CPSF7-219ENST00000539952 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
CPSF7-219ENST00000539952 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
CPSF7-219ENST00000539952 SPRR2FQ96RM1 72 aa2.62□□□□□ -1.99
CPSF7-219ENST00000539952 PLAC4Q8WY50 150 aa2.61□□□□□ -1.99
CPSF7-219ENST00000539952 LUZP6Q538Z0 58 aa2.57□□□□□ -2
CPSF7-219ENST00000539952 SPRR2DP22532 72 aa2.56□□□□□ -2
CPSF7-219ENST00000539952 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
CPSF7-219ENST00000539952 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
CPSF7-219ENST00000539952 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
CPSF7-219ENST00000539952 PRO2289Q9P1D8 64 aa2.54□□□□□ -2
CPSF7-219ENST00000539952 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
CPSF7-219ENST00000539952 CAMK2N1Q7Z7J9 78 aa2.52□□□□□ -2.01
CPSF7-219ENST00000539952 TNP1P09430 55 aa2.49□□□□□ -2.01
CPSF7-219ENST00000539952 KRTAP10-12P60413 245 aa2.47□□□□□ -2.01
CPSF7-219ENST00000539952 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
CPSF7-219ENST00000539952 MT1XP80297 61 aa2.45□□□□□ -2.02
CPSF7-219ENST00000539952 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
CPSF7-219ENST00000539952 KRTAP10-7P60409 375 aaPredicted RBP2.41□□□□□ -2.02
CPSF7-219ENST00000539952 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
CPSF7-219ENST00000539952 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
CPSF7-219ENST00000539952 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
CPSF7-219ENST00000539952 INE1O15225 51 aa2.3□□□□□ -2.04
CPSF7-219ENST00000539952 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
CPSF7-219ENST00000539952 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
CPSF7-219ENST00000539952 KRTAP19-3Q7Z4W3 81 aa2.25□□□□□ -2.05
CPSF7-219ENST00000539952 MT4P47944 62 aa2.24□□□□□ -2.05
CPSF7-219ENST00000539952 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
CPSF7-219ENST00000539952 MT1GP13640 62 aa2.2□□□□□ -2.06
CPSF7-219ENST00000539952 KRTAP19-7Q3SYF9 63 aa2.2□□□□□ -2.06
CPSF7-219ENST00000539952 MT1EP04732 61 aa2.19□□□□□ -2.06
CPSF7-219ENST00000539952 KRTAP9-6A8MVA2 160 aa2.18□□□□□ -2.06
CPSF7-219ENST00000539952 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
CPSF7-219ENST00000539952 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
CPSF7-219ENST00000539952 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
CPSF7-219ENST00000539952 MT1MQ8N339 61 aa2.11□□□□□ -2.07
CPSF7-219ENST00000539952 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
CPSF7-219ENST00000539952 MT1LQ93083 61 aa2.06□□□□□ -2.08
CPSF7-219ENST00000539952 KRTAP20-2Q3LI61 65 aa2.05□□□□□ -2.08
CPSF7-219ENST00000539952 KRTAP4-3Q9BYR4 195 aa2.04□□□□□ -2.08
CPSF7-219ENST00000539952 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
CPSF7-219ENST00000539952 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
CPSF7-219ENST00000539952 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
CPSF7-219ENST00000539952 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
CPSF7-219ENST00000539952 LCE3DQ9BYE3 92 aa1.89□□□□□ -2.11
CPSF7-219ENST00000539952 SYNE1Q8NF91 8797 aaKnown RBP1.89□□□□□ -2.11
CPSF7-219ENST00000539952 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
CPSF7-219ENST00000539952 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
CPSF7-219ENST00000539952 MT1AP04731 61 aa1.76□□□□□ -2.13
CPSF7-219ENST00000539952 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
CPSF7-219ENST00000539952 OBSCNQ5VST9 7968 aa1.74□□□□□ -2.13
CPSF7-219ENST00000539952 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
CPSF7-219ENST00000539952 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
CPSF7-219ENST00000539952 LCE1BQ5T7P3 118 aa1.57□□□□□ -2.16
CPSF7-219ENST00000539952 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
CPSF7-219ENST00000539952 PRM1P04553 51 aa1.5□□□□□ -2.17
CPSF7-219ENST00000539952 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
CPSF7-219ENST00000539952 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
CPSF7-219ENST00000539952 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
CPSF7-219ENST00000539952 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 140 ms