RNA–Protein interactions for RNA: ENST00000539743.5

CPT1A-205, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CPT1A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-205ENST00000539743 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
CPT1A-205ENST00000539743 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
CPT1A-205ENST00000539743 KRTAP19-7Q3SYF9 63 aa4.14□□□□□ -1.75
CPT1A-205ENST00000539743 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
CPT1A-205ENST00000539743 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
CPT1A-205ENST00000539743 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
CPT1A-205ENST00000539743 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
CPT1A-205ENST00000539743 MT1LQ93083 61 aa4.07□□□□□ -1.76
CPT1A-205ENST00000539743 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
CPT1A-205ENST00000539743 MT1EP04732 61 aa4□□□□□ -1.77
CPT1A-205ENST00000539743 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
CPT1A-205ENST00000539743 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.78
CPT1A-205ENST00000539743 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
CPT1A-205ENST00000539743 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
CPT1A-205ENST00000539743 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
CPT1A-205ENST00000539743 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.8
CPT1A-205ENST00000539743 MT1GP13640 62 aa3.82□□□□□ -1.8
CPT1A-205ENST00000539743 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
CPT1A-205ENST00000539743 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
CPT1A-205ENST00000539743 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
CPT1A-205ENST00000539743 MT1AP04731 61 aa3.75□□□□□ -1.81
CPT1A-205ENST00000539743 MT1MQ8N339 61 aa3.74□□□□□ -1.81
CPT1A-205ENST00000539743 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
CPT1A-205ENST00000539743 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
CPT1A-205ENST00000539743 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
CPT1A-205ENST00000539743 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
CPT1A-205ENST00000539743 NEBP20929 6669 aa3.72□□□□□ -1.81
CPT1A-205ENST00000539743 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
CPT1A-205ENST00000539743 PRM1P04553 51 aa3.7□□□□□ -1.82
CPT1A-205ENST00000539743 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
CPT1A-205ENST00000539743 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
CPT1A-205ENST00000539743 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
CPT1A-205ENST00000539743 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
CPT1A-205ENST00000539743 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
CPT1A-205ENST00000539743 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
CPT1A-205ENST00000539743 DSTQ03001 7570 aaKnown RBP3.6□□□□□ -1.83
CPT1A-205ENST00000539743 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
CPT1A-205ENST00000539743 MT3P25713 68 aa3.51□□□□□ -1.85
CPT1A-205ENST00000539743 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
CPT1A-205ENST00000539743 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
CPT1A-205ENST00000539743 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
CPT1A-205ENST00000539743 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
CPT1A-205ENST00000539743 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
CPT1A-205ENST00000539743 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
CPT1A-205ENST00000539743 SPRR2EP22531 72 aa3.38□□□□□ -1.87
CPT1A-205ENST00000539743 SPRR2BP35325 72 aa3.38□□□□□ -1.87
CPT1A-205ENST00000539743 SPRR2AP35326 72 aa3.38□□□□□ -1.87
CPT1A-205ENST00000539743 SPRR2DP22532 72 aa3.25□□□□□ -1.89
CPT1A-205ENST00000539743 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
CPT1A-205ENST00000539743 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
CPT1A-205ENST00000539743 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
CPT1A-205ENST00000539743 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
CPT1A-205ENST00000539743 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
CPT1A-205ENST00000539743 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
CPT1A-205ENST00000539743 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
CPT1A-205ENST00000539743 MT4P47944 62 aa2.82□□□□□ -1.96
CPT1A-205ENST00000539743 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
CPT1A-205ENST00000539743 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
CPT1A-205ENST00000539743 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
CPT1A-205ENST00000539743 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
CPT1A-205ENST00000539743 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.97
CPT1A-205ENST00000539743 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
CPT1A-205ENST00000539743 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
CPT1A-205ENST00000539743 MUC5ACP98088 5654 aa2.58□□□□□ -2
CPT1A-205ENST00000539743 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
CPT1A-205ENST00000539743 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
CPT1A-205ENST00000539743 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
CPT1A-205ENST00000539743 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
CPT1A-205ENST00000539743 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
CPT1A-205ENST00000539743 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
CPT1A-205ENST00000539743 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
CPT1A-205ENST00000539743 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
CPT1A-205ENST00000539743 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
CPT1A-205ENST00000539743 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
CPT1A-205ENST00000539743 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
CPT1A-205ENST00000539743 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
CPT1A-205ENST00000539743 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 151.4 ms