RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
DDB1-213ENST00000539332 MACF1Q9UPN3 7388 aaKnown RBP3.37□□□□□ -1.87
DDB1-213ENST00000539332 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
DDB1-213ENST00000539332 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.32□□□□□ -1.88
DDB1-213ENST00000539332 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
DDB1-213ENST00000539332 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
DDB1-213ENST00000539332 KRTAP19-5Q3LI72 72 aa3.28□□□□□ -1.89
DDB1-213ENST00000539332 LCE1FQ5T754 118 aa3.28□□□□□ -1.89
DDB1-213ENST00000539332 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
DDB1-213ENST00000539332 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
DDB1-213ENST00000539332 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
DDB1-213ENST00000539332 SPRR2FQ96RM1 72 aa3.21□□□□□ -1.9
DDB1-213ENST00000539332 MT3P25713 68 aa3.2□□□□□ -1.9
DDB1-213ENST00000539332 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
DDB1-213ENST00000539332 MT1EP04732 61 aa3.2□□□□□ -1.9
DDB1-213ENST00000539332 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
DDB1-213ENST00000539332 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
DDB1-213ENST00000539332 MT1LQ93083 61 aa3.14□□□□□ -1.91
DDB1-213ENST00000539332 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
DDB1-213ENST00000539332 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
DDB1-213ENST00000539332 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
DDB1-213ENST00000539332 SPRR2EP22531 72 aa3.07□□□□□ -1.92
DDB1-213ENST00000539332 SPRR2BP35325 72 aa3.07□□□□□ -1.92
DDB1-213ENST00000539332 SPRR2AP35326 72 aa3.07□□□□□ -1.92
DDB1-213ENST00000539332 MT1GP13640 62 aa3.05□□□□□ -1.92
DDB1-213ENST00000539332 NEBP20929 6669 aa3.04□□□□□ -1.92
DDB1-213ENST00000539332 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
DDB1-213ENST00000539332 MT1MQ8N339 61 aa3□□□□□ -1.93
DDB1-213ENST00000539332 KRTAP4-7Q9BYR0 210 aa3□□□□□ -1.93
DDB1-213ENST00000539332 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
DDB1-213ENST00000539332 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
DDB1-213ENST00000539332 SPRR2DP22532 72 aa2.96□□□□□ -1.94
DDB1-213ENST00000539332 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
DDB1-213ENST00000539332 LCE3BQ5TA77 95 aa2.95□□□□□ -1.94
DDB1-213ENST00000539332 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
DDB1-213ENST00000539332 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
DDB1-213ENST00000539332 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
DDB1-213ENST00000539332 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
DDB1-213ENST00000539332 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
DDB1-213ENST00000539332 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
DDB1-213ENST00000539332 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
DDB1-213ENST00000539332 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.96
DDB1-213ENST00000539332 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
DDB1-213ENST00000539332 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
DDB1-213ENST00000539332 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
DDB1-213ENST00000539332 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
DDB1-213ENST00000539332 KRTAP4-9Q9BYQ8 210 aa2.71□□□□□ -1.98
DDB1-213ENST00000539332 MT1AP04731 61 aa2.67□□□□□ -1.98
DDB1-213ENST00000539332 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
DDB1-213ENST00000539332 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
DDB1-213ENST00000539332 MT4P47944 62 aa2.58□□□□□ -2
DDB1-213ENST00000539332 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
DDB1-213ENST00000539332 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
DDB1-213ENST00000539332 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
DDB1-213ENST00000539332 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
DDB1-213ENST00000539332 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
DDB1-213ENST00000539332 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
DDB1-213ENST00000539332 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
DDB1-213ENST00000539332 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
DDB1-213ENST00000539332 PRM1P04553 51 aa2.36□□□□□ -2.03
DDB1-213ENST00000539332 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
DDB1-213ENST00000539332 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
DDB1-213ENST00000539332 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
DDB1-213ENST00000539332 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
DDB1-213ENST00000539332 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
DDB1-213ENST00000539332 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
DDB1-213ENST00000539332 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
DDB1-213ENST00000539332 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
DDB1-213ENST00000539332 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
DDB1-213ENST00000539332 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
DDB1-213ENST00000539332 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
DDB1-213ENST00000539332 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
DDB1-213ENST00000539332 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
DDB1-213ENST00000539332 KRTAP4-4Q9BYR3 166 aa1.62□□□□□ -2.15
DDB1-213ENST00000539332 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
DDB1-213ENST00000539332 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
DDB1-213ENST00000539332 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
DDB1-213ENST00000539332 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 115.3 ms