RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 KRTAP9-6A8MVA2 160 aa2.22□□□□□ -2.05
SCAPER-203ENST00000538941 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.06
SCAPER-203ENST00000538941 LCE3BQ5TA77 95 aa2.19□□□□□ -2.06
SCAPER-203ENST00000538941 UBR4Q5T4S7 5183 aa2.18□□□□□ -2.06
SCAPER-203ENST00000538941 SPRR2FQ96RM1 72 aa2.16□□□□□ -2.06
SCAPER-203ENST00000538941 KRTAP19-3Q7Z4W3 81 aa2.14□□□□□ -2.07
SCAPER-203ENST00000538941 LOC100996750A0A140TA64 210 aa2.14□□□□□ -2.07
SCAPER-203ENST00000538941 MT3P25713 68 aa2.13□□□□□ -2.07
SCAPER-203ENST00000538941 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
SCAPER-203ENST00000538941 MT1MQ8N339 61 aa2.12□□□□□ -2.07
SCAPER-203ENST00000538941 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
SCAPER-203ENST00000538941 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
SCAPER-203ENST00000538941 SPRR2EP22531 72 aa2.11□□□□□ -2.07
SCAPER-203ENST00000538941 SPRR2BP35325 72 aa2.11□□□□□ -2.07
SCAPER-203ENST00000538941 SPRR2AP35326 72 aa2.11□□□□□ -2.07
SCAPER-203ENST00000538941 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
SCAPER-203ENST00000538941 OBSCNQ5VST9 7968 aa2.09□□□□□ -2.08
SCAPER-203ENST00000538941 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.07□□□□□ -2.08
SCAPER-203ENST00000538941 PRM1P04553 51 aa2.07□□□□□ -2.08
SCAPER-203ENST00000538941 KRTAP9-7A8MTY7 169 aa2.06□□□□□ -2.08
SCAPER-203ENST00000538941 SPRR2DP22532 72 aa2.06□□□□□ -2.08
SCAPER-203ENST00000538941 KRTAP20-1Q3LI63 56 aa2.05□□□□□ -2.08
SCAPER-203ENST00000538941 LCE4AQ5TA78 99 aa2.05□□□□□ -2.08
SCAPER-203ENST00000538941 KRTAP4-6Q9BYQ5 205 aa2.02□□□□□ -2.09
SCAPER-203ENST00000538941 LCE1AQ5T7P2 110 aa2.01□□□□□ -2.09
SCAPER-203ENST00000538941 MT1AP04731 61 aa2□□□□□ -2.09
SCAPER-203ENST00000538941 KMT2DO14686 5537 aa1.99□□□□□ -2.09
SCAPER-203ENST00000538941 KRTAP4-9Q9BYQ8 210 aa1.99□□□□□ -2.09
SCAPER-203ENST00000538941 SYNE2Q8WXH0 6885 aaKnown RBP1.94□□□□□ -2.1
SCAPER-203ENST00000538941 KRTAP5-9P26371 169 aa1.94□□□□□ -2.1
SCAPER-203ENST00000538941 USH2AO75445 5202 aa1.92□□□□□ -2.1
SCAPER-203ENST00000538941 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
SCAPER-203ENST00000538941 LCE5AQ5TCM9 118 aa1.91□□□□□ -2.1
SCAPER-203ENST00000538941 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
SCAPER-203ENST00000538941 SYNE1Q8NF91 8797 aaKnown RBP1.88□□□□□ -2.11
SCAPER-203ENST00000538941 KRTAP9-9Q9BYP9 154 aa1.88□□□□□ -2.11
SCAPER-203ENST00000538941 KRTAP9-4Q9BYQ2 154 aa1.88□□□□□ -2.11
SCAPER-203ENST00000538941 KRTAP2-2Q9BYT5 123 aa1.88□□□□□ -2.11
SCAPER-203ENST00000538941 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
SCAPER-203ENST00000538941 KRTAP4-12Q9BQ66 201 aa1.86□□□□□ -2.11
SCAPER-203ENST00000538941 MACF1Q9UPN3 7388 aaKnown RBP1.84□□□□□ -2.11
SCAPER-203ENST00000538941 FSIP2Q5CZC0 6907 aa1.83□□□□□ -2.12
SCAPER-203ENST00000538941 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
SCAPER-203ENST00000538941 NEBP20929 6669 aa1.79□□□□□ -2.12
SCAPER-203ENST00000538941 LCE1EQ5T753 118 aa1.78□□□□□ -2.12
SCAPER-203ENST00000538941 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
SCAPER-203ENST00000538941 LCE1DQ5T752 114 aa1.74□□□□□ -2.13
SCAPER-203ENST00000538941 DSTQ03001 7570 aaKnown RBP1.73□□□□□ -2.13
SCAPER-203ENST00000538941 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
SCAPER-203ENST00000538941 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
SCAPER-203ENST00000538941 MT4P47944 62 aa1.71□□□□□ -2.14
SCAPER-203ENST00000538941 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
SCAPER-203ENST00000538941 LCE1FQ5T754 118 aa1.67□□□□□ -2.14
SCAPER-203ENST00000538941 KRTAP4-2Q9BYR5 136 aa1.63□□□□□ -2.15
SCAPER-203ENST00000538941 KRTAP4-11Q9BYQ6 195 aa1.63□□□□□ -2.15
SCAPER-203ENST00000538941 LCE1BQ5T7P3 118 aa1.61□□□□□ -2.15
SCAPER-203ENST00000538941 KRTAP5-4Q6L8H1 288 aa1.59□□□□□ -2.16
SCAPER-203ENST00000538941 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
SCAPER-203ENST00000538941 MDN1Q9NU22 5596 aa1.56□□□□□ -2.16
SCAPER-203ENST00000538941 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
SCAPER-203ENST00000538941 KRTAP20-2Q3LI61 65 aa1.55□□□□□ -2.16
SCAPER-203ENST00000538941 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
SCAPER-203ENST00000538941 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
SCAPER-203ENST00000538941 KRTAP5-3Q6L8H2 238 aa1.4□□□□□ -2.19
SCAPER-203ENST00000538941 KRTAP5-2Q701N4 177 aa1.38□□□□□ -2.19
SCAPER-203ENST00000538941 KRTAP4-4Q9BYR3 166 aa1.35□□□□□ -2.19
SCAPER-203ENST00000538941 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
SCAPER-203ENST00000538941 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
SCAPER-203ENST00000538941 MUC5ACP98088 5654 aa1.28□□□□□ -2.2
SCAPER-203ENST00000538941 KRTAP5-8O75690 187 aa1.26□□□□□ -2.21
SCAPER-203ENST00000538941 KRTAP5-1Q6L8H4 278 aa1.18□□□□□ -2.22
SCAPER-203ENST00000538941 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
SCAPER-203ENST00000538941 KRTAP5-11Q6L8G4 156 aa1.15□□□□□ -2.23
SCAPER-203ENST00000538941 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
SCAPER-203ENST00000538941 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.12□□□□□ -2.23
SCAPER-203ENST00000538941 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
SCAPER-203ENST00000538941 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 80 ms