RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 CRIPTQ9P021 101 aa2.35□□□□□ -2.03
LINC02408-202ENST00000538573 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
LINC02408-202ENST00000538573 KRTAP13-4Q3LI77 160 aa2.31□□□□□ -2.04
LINC02408-202ENST00000538573 SPRR2GQ9BYE4 73 aa2.31□□□□□ -2.04
LINC02408-202ENST00000538573 A0A0D9SG42 100 aa2.3□□□□□ -2.04
LINC02408-202ENST00000538573 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
LINC02408-202ENST00000538573 INE1O15225 51 aa2.28□□□□□ -2.04
LINC02408-202ENST00000538573 PLAC4Q8WY50 150 aa2.28□□□□□ -2.04
LINC02408-202ENST00000538573 KRTAP19-8Q3LI54 63 aa2.26□□□□□ -2.05
LINC02408-202ENST00000538573 MT1BP07438 61 aa2.24□□□□□ -2.05
LINC02408-202ENST00000538573 KRTAP12-1P59990 96 aa2.23□□□□□ -2.05
LINC02408-202ENST00000538573 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
LINC02408-202ENST00000538573 C10orf95Q9H7T3 257 aa2.16□□□□□ -2.06
LINC02408-202ENST00000538573 MT1XP80297 61 aa2.15□□□□□ -2.07
LINC02408-202ENST00000538573 KRTAP19-6Q3LI70 58 aa2.15□□□□□ -2.07
LINC02408-202ENST00000538573 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
LINC02408-202ENST00000538573 CRCT1Q9UGL9 99 aa2.14□□□□□ -2.07
LINC02408-202ENST00000538573 USH2AO75445 5202 aa2.14□□□□□ -2.07
LINC02408-202ENST00000538573 PP632Q6XCG6 107 aa2.09□□□□□ -2.07
LINC02408-202ENST00000538573 FSIP2Q5CZC0 6907 aa2.09□□□□□ -2.07
LINC02408-202ENST00000538573 SSPOA2VEC9 5147 aa2.09□□□□□ -2.08
LINC02408-202ENST00000538573 TNP1P09430 55 aa2.08□□□□□ -2.08
LINC02408-202ENST00000538573 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
LINC02408-202ENST00000538573 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
LINC02408-202ENST00000538573 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
LINC02408-202ENST00000538573 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
LINC02408-202ENST00000538573 KRTAP8-1Q8IUC2 63 aa1.98□□□□□ -2.09
LINC02408-202ENST00000538573 KRTAP19-5Q3LI72 72 aa1.94□□□□□ -2.1
LINC02408-202ENST00000538573 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
LINC02408-202ENST00000538573 KRTAP6-3Q3LI67 103 aa1.92□□□□□ -2.1
LINC02408-202ENST00000538573 KRTAP5-5Q701N2 237 aaPredicted RBP1.92□□□□□ -2.1
LINC02408-202ENST00000538573 SPRR2FQ96RM1 72 aa1.92□□□□□ -2.1
LINC02408-202ENST00000538573 MACF1Q9UPN3 7388 aaKnown RBP1.91□□□□□ -2.1
LINC02408-202ENST00000538573 KRTAP19-7Q3SYF9 63 aa1.91□□□□□ -2.1
LINC02408-202ENST00000538573 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
LINC02408-202ENST00000538573 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.11
LINC02408-202ENST00000538573 KMT2DO14686 5537 aa1.9□□□□□ -2.11
LINC02408-202ENST00000538573 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
LINC02408-202ENST00000538573 MT1EP04732 61 aa1.89□□□□□ -2.11
LINC02408-202ENST00000538573 SPRR2EP22531 72 aa1.85□□□□□ -2.11
LINC02408-202ENST00000538573 SPRR2BP35325 72 aa1.85□□□□□ -2.11
LINC02408-202ENST00000538573 SPRR2AP35326 72 aa1.85□□□□□ -2.11
LINC02408-202ENST00000538573 SYNE2Q8WXH0 6885 aaKnown RBP1.84□□□□□ -2.11
LINC02408-202ENST00000538573 MT1LQ93083 61 aa1.84□□□□□ -2.11
LINC02408-202ENST00000538573 KRTAP19-3Q7Z4W3 81 aa1.83□□□□□ -2.12
LINC02408-202ENST00000538573 MT1GP13640 62 aa1.82□□□□□ -2.12
LINC02408-202ENST00000538573 MUC12Q9UKN1 5478 aa1.78□□□□□ -2.12
LINC02408-202ENST00000538573 SPRR2DP22532 72 aa1.78□□□□□ -2.12
LINC02408-202ENST00000538573 MT1MQ8N339 61 aa1.78□□□□□ -2.12
LINC02408-202ENST00000538573 MDN1Q9NU22 5596 aa1.71□□□□□ -2.14
LINC02408-202ENST00000538573 NEBP20929 6669 aa1.7□□□□□ -2.14
LINC02408-202ENST00000538573 KRTAP2-3P0C7H8 128 aa1.7□□□□□ -2.14
LINC02408-202ENST00000538573 KRTAP2-4Q9BYR9 128 aa1.7□□□□□ -2.14
LINC02408-202ENST00000538573 KRTAP20-1Q3LI63 56 aa1.69□□□□□ -2.14
LINC02408-202ENST00000538573 KRTAP2-1Q9BYU5 128 aa1.66□□□□□ -2.14
LINC02408-202ENST00000538573 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
LINC02408-202ENST00000538573 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
LINC02408-202ENST00000538573 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
LINC02408-202ENST00000538573 MT1AP04731 61 aa1.57□□□□□ -2.16
LINC02408-202ENST00000538573 KRTAP12-4P60329 112 aa1.56□□□□□ -2.16
LINC02408-202ENST00000538573 KRTAP6-1Q3LI64 71 aa1.56□□□□□ -2.16
LINC02408-202ENST00000538573 MT4P47944 62 aa1.55□□□□□ -2.16
LINC02408-202ENST00000538573 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
LINC02408-202ENST00000538573 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
LINC02408-202ENST00000538573 KRTAP6-2Q3LI66 62 aa1.45□□□□□ -2.18
LINC02408-202ENST00000538573 SYNE1Q8NF91 8797 aaKnown RBP1.44□□□□□ -2.18
LINC02408-202ENST00000538573 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
LINC02408-202ENST00000538573 KRTAP5-10Q6L8G5 202 aa1.29□□□□□ -2.2
LINC02408-202ENST00000538573 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
LINC02408-202ENST00000538573 PRM1P04553 51 aa1.25□□□□□ -2.21
LINC02408-202ENST00000538573 GPR98Q8WXG9 6306 aa1.21□□□□□ -2.22
LINC02408-202ENST00000538573 MUC5ACP98088 5654 aa1.09□□□□□ -2.23
LINC02408-202ENST00000538573 MUC5BQ9HC84 5762 aaPredicted RBP1.02□□□□□ -2.25
LINC02408-202ENST00000538573 AHNAKQ09666 5890 aaKnown RBP0.98□□□□□ -2.25
LINC02408-202ENST00000538573 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
LINC02408-202ENST00000538573 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
LINC02408-202ENST00000538573 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 130.3 ms