RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
TRIM25-202ENST00000537230 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
TRIM25-202ENST00000537230 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
TRIM25-202ENST00000537230 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
TRIM25-202ENST00000537230 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
TRIM25-202ENST00000537230 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
TRIM25-202ENST00000537230 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
TRIM25-202ENST00000537230 KRTAP19-3Q7Z4W3 81 aa4.22□□□□□ -1.73
TRIM25-202ENST00000537230 MT1MQ8N339 61 aa4.22□□□□□ -1.73
TRIM25-202ENST00000537230 MT1GP13640 62 aa4.21□□□□□ -1.74
TRIM25-202ENST00000537230 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
TRIM25-202ENST00000537230 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
TRIM25-202ENST00000537230 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
TRIM25-202ENST00000537230 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
TRIM25-202ENST00000537230 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
TRIM25-202ENST00000537230 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
TRIM25-202ENST00000537230 KRTAP9-2Q9BYQ4 174 aa4.03□□□□□ -1.76
TRIM25-202ENST00000537230 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
TRIM25-202ENST00000537230 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
TRIM25-202ENST00000537230 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
TRIM25-202ENST00000537230 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
TRIM25-202ENST00000537230 LCE3BQ5TA77 95 aa3.87□□□□□ -1.79
TRIM25-202ENST00000537230 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
TRIM25-202ENST00000537230 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
TRIM25-202ENST00000537230 SPRR2EP22531 72 aa3.8□□□□□ -1.8
TRIM25-202ENST00000537230 SPRR2BP35325 72 aa3.8□□□□□ -1.8
TRIM25-202ENST00000537230 SPRR2AP35326 72 aa3.8□□□□□ -1.8
TRIM25-202ENST00000537230 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
TRIM25-202ENST00000537230 MT1AP04731 61 aa3.74□□□□□ -1.81
TRIM25-202ENST00000537230 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
TRIM25-202ENST00000537230 SPRR2DP22532 72 aa3.63□□□□□ -1.83
TRIM25-202ENST00000537230 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
TRIM25-202ENST00000537230 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
TRIM25-202ENST00000537230 KRTAP9-7A8MTY7 169 aa3.58□□□□□ -1.84
TRIM25-202ENST00000537230 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
TRIM25-202ENST00000537230 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
TRIM25-202ENST00000537230 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
TRIM25-202ENST00000537230 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
TRIM25-202ENST00000537230 PRM1P04553 51 aa3.52□□□□□ -1.85
TRIM25-202ENST00000537230 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
TRIM25-202ENST00000537230 NEBP20929 6669 aa3.44□□□□□ -1.86
TRIM25-202ENST00000537230 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
TRIM25-202ENST00000537230 MT3P25713 68 aa3.35□□□□□ -1.87
TRIM25-202ENST00000537230 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
TRIM25-202ENST00000537230 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
TRIM25-202ENST00000537230 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
TRIM25-202ENST00000537230 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
TRIM25-202ENST00000537230 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
TRIM25-202ENST00000537230 MT4P47944 62 aa3.25□□□□□ -1.89
TRIM25-202ENST00000537230 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
TRIM25-202ENST00000537230 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
TRIM25-202ENST00000537230 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
TRIM25-202ENST00000537230 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
TRIM25-202ENST00000537230 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
TRIM25-202ENST00000537230 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
TRIM25-202ENST00000537230 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
TRIM25-202ENST00000537230 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
TRIM25-202ENST00000537230 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
TRIM25-202ENST00000537230 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
TRIM25-202ENST00000537230 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
TRIM25-202ENST00000537230 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
TRIM25-202ENST00000537230 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
TRIM25-202ENST00000537230 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
TRIM25-202ENST00000537230 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
TRIM25-202ENST00000537230 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
TRIM25-202ENST00000537230 KRTAP5-8O75690 187 aa2.53□□□□□ -2
TRIM25-202ENST00000537230 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
TRIM25-202ENST00000537230 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
TRIM25-202ENST00000537230 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
TRIM25-202ENST00000537230 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
TRIM25-202ENST00000537230 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
TRIM25-202ENST00000537230 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
TRIM25-202ENST00000537230 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
TRIM25-202ENST00000537230 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
TRIM25-202ENST00000537230 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
TRIM25-202ENST00000537230 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
TRIM25-202ENST00000537230 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 91 ms