RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 KRTAP19-3Q7Z4W3 81 aa3.12□□□□□ -1.91
UBE3B-207ENST00000537063 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
UBE3B-207ENST00000537063 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
UBE3B-207ENST00000537063 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
UBE3B-207ENST00000537063 MT1GP13640 62 aa3.1□□□□□ -1.91
UBE3B-207ENST00000537063 MT1MQ8N339 61 aa3.1□□□□□ -1.91
UBE3B-207ENST00000537063 INE1O15225 51 aa3.07□□□□□ -1.92
UBE3B-207ENST00000537063 LCE5AQ5TCM9 118 aa3.05□□□□□ -1.92
UBE3B-207ENST00000537063 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
UBE3B-207ENST00000537063 KRTAP9-2Q9BYQ4 174 aa3.05□□□□□ -1.92
UBE3B-207ENST00000537063 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
UBE3B-207ENST00000537063 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
UBE3B-207ENST00000537063 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
UBE3B-207ENST00000537063 SPRR2FQ96RM1 72 aa3.02□□□□□ -1.93
UBE3B-207ENST00000537063 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
UBE3B-207ENST00000537063 KRTAP9-6A0A140TA67 174 aa3□□□□□ -1.93
UBE3B-207ENST00000537063 KRTAP5-9P26371 169 aa2.98□□□□□ -1.93
UBE3B-207ENST00000537063 CRCT1Q9UGL9 99 aa2.97□□□□□ -1.93
UBE3B-207ENST00000537063 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
UBE3B-207ENST00000537063 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
UBE3B-207ENST00000537063 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.94
UBE3B-207ENST00000537063 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
UBE3B-207ENST00000537063 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
UBE3B-207ENST00000537063 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
UBE3B-207ENST00000537063 SPRR2EP22531 72 aa2.8□□□□□ -1.96
UBE3B-207ENST00000537063 SPRR2BP35325 72 aa2.8□□□□□ -1.96
UBE3B-207ENST00000537063 SPRR2AP35326 72 aa2.8□□□□□ -1.96
UBE3B-207ENST00000537063 LCE3BQ5TA77 95 aa2.79□□□□□ -1.96
UBE3B-207ENST00000537063 KRTAP4-9Q9BYQ8 210 aa2.79□□□□□ -1.96
UBE3B-207ENST00000537063 MT1AP04731 61 aa2.78□□□□□ -1.96
UBE3B-207ENST00000537063 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
UBE3B-207ENST00000537063 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
UBE3B-207ENST00000537063 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
UBE3B-207ENST00000537063 LCE1DQ5T752 114 aa2.76□□□□□ -1.97
UBE3B-207ENST00000537063 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
UBE3B-207ENST00000537063 SPRR2DP22532 72 aa2.7□□□□□ -1.98
UBE3B-207ENST00000537063 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
UBE3B-207ENST00000537063 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
UBE3B-207ENST00000537063 NEBP20929 6669 aa2.57□□□□□ -2
UBE3B-207ENST00000537063 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
UBE3B-207ENST00000537063 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
UBE3B-207ENST00000537063 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
UBE3B-207ENST00000537063 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
UBE3B-207ENST00000537063 KRTAP9-7A8MTY7 169 aa2.49□□□□□ -2.01
UBE3B-207ENST00000537063 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
UBE3B-207ENST00000537063 MT3P25713 68 aa2.48□□□□□ -2.01
UBE3B-207ENST00000537063 KRTAP5-3Q6L8H2 238 aa2.48□□□□□ -2.01
UBE3B-207ENST00000537063 LCE4AQ5TA78 99 aa2.41□□□□□ -2.02
UBE3B-207ENST00000537063 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
UBE3B-207ENST00000537063 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
UBE3B-207ENST00000537063 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
UBE3B-207ENST00000537063 MT4P47944 62 aa2.32□□□□□ -2.04
UBE3B-207ENST00000537063 KRTAP2-2Q9BYT5 123 aa2.31□□□□□ -2.04
UBE3B-207ENST00000537063 PRM1P04553 51 aa2.31□□□□□ -2.04
UBE3B-207ENST00000537063 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
UBE3B-207ENST00000537063 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
UBE3B-207ENST00000537063 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
UBE3B-207ENST00000537063 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
UBE3B-207ENST00000537063 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
UBE3B-207ENST00000537063 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
UBE3B-207ENST00000537063 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
UBE3B-207ENST00000537063 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
UBE3B-207ENST00000537063 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
UBE3B-207ENST00000537063 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
UBE3B-207ENST00000537063 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
UBE3B-207ENST00000537063 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.11
UBE3B-207ENST00000537063 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
UBE3B-207ENST00000537063 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
UBE3B-207ENST00000537063 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
UBE3B-207ENST00000537063 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.15
UBE3B-207ENST00000537063 LCE1FQ5T754 118 aa1.59□□□□□ -2.15
UBE3B-207ENST00000537063 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
UBE3B-207ENST00000537063 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
UBE3B-207ENST00000537063 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
UBE3B-207ENST00000537063 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
UBE3B-207ENST00000537063 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
UBE3B-207ENST00000537063 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 95.2 ms