RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
PTCD2-211ENST00000536805 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.69
PTCD2-211ENST00000536805 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
PTCD2-211ENST00000536805 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
PTCD2-211ENST00000536805 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
PTCD2-211ENST00000536805 KRTAP4-9Q9BYQ8 210 aa4.41□□□□□ -1.7
PTCD2-211ENST00000536805 USH2AO75445 5202 aa4.4□□□□□ -1.7
PTCD2-211ENST00000536805 NEBP20929 6669 aa4.4□□□□□ -1.71
PTCD2-211ENST00000536805 KRTAP20-1Q3LI63 56 aa4.39□□□□□ -1.71
PTCD2-211ENST00000536805 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
PTCD2-211ENST00000536805 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
PTCD2-211ENST00000536805 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
PTCD2-211ENST00000536805 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
PTCD2-211ENST00000536805 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
PTCD2-211ENST00000536805 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
PTCD2-211ENST00000536805 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
PTCD2-211ENST00000536805 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
PTCD2-211ENST00000536805 KRTAP19-7Q3SYF9 63 aa4.24□□□□□ -1.73
PTCD2-211ENST00000536805 GPR98Q8WXG9 6306 aa4.18□□□□□ -1.74
PTCD2-211ENST00000536805 KMT2DO14686 5537 aa4.16□□□□□ -1.74
PTCD2-211ENST00000536805 MT1LQ93083 61 aa4.14□□□□□ -1.75
PTCD2-211ENST00000536805 MT1EP04732 61 aa4.12□□□□□ -1.75
PTCD2-211ENST00000536805 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
PTCD2-211ENST00000536805 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
PTCD2-211ENST00000536805 KRTAP19-6Q3LI70 58 aa4.05□□□□□ -1.76
PTCD2-211ENST00000536805 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
PTCD2-211ENST00000536805 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
PTCD2-211ENST00000536805 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
PTCD2-211ENST00000536805 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
PTCD2-211ENST00000536805 MT1GP13640 62 aa3.83□□□□□ -1.8
PTCD2-211ENST00000536805 MT1MQ8N339 61 aa3.83□□□□□ -1.8
PTCD2-211ENST00000536805 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
PTCD2-211ENST00000536805 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
PTCD2-211ENST00000536805 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
PTCD2-211ENST00000536805 LCE5AQ5TCM9 118 aa3.66□□□□□ -1.82
PTCD2-211ENST00000536805 MT1AP04731 61 aa3.61□□□□□ -1.83
PTCD2-211ENST00000536805 SPRR2EP22531 72 aa3.61□□□□□ -1.83
PTCD2-211ENST00000536805 SPRR2BP35325 72 aa3.61□□□□□ -1.83
PTCD2-211ENST00000536805 SPRR2AP35326 72 aa3.61□□□□□ -1.83
PTCD2-211ENST00000536805 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
PTCD2-211ENST00000536805 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
PTCD2-211ENST00000536805 SPRR2DP22532 72 aa3.51□□□□□ -1.85
PTCD2-211ENST00000536805 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
PTCD2-211ENST00000536805 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
PTCD2-211ENST00000536805 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
PTCD2-211ENST00000536805 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
PTCD2-211ENST00000536805 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.85
PTCD2-211ENST00000536805 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
PTCD2-211ENST00000536805 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
PTCD2-211ENST00000536805 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
PTCD2-211ENST00000536805 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
PTCD2-211ENST00000536805 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
PTCD2-211ENST00000536805 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
PTCD2-211ENST00000536805 PRM1P04553 51 aa3.35□□□□□ -1.87
PTCD2-211ENST00000536805 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
PTCD2-211ENST00000536805 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
PTCD2-211ENST00000536805 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
PTCD2-211ENST00000536805 MT3P25713 68 aa3.13□□□□□ -1.91
PTCD2-211ENST00000536805 MT4P47944 62 aa3.07□□□□□ -1.92
PTCD2-211ENST00000536805 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
PTCD2-211ENST00000536805 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
PTCD2-211ENST00000536805 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.96
PTCD2-211ENST00000536805 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
PTCD2-211ENST00000536805 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
PTCD2-211ENST00000536805 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
PTCD2-211ENST00000536805 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
PTCD2-211ENST00000536805 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
PTCD2-211ENST00000536805 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
PTCD2-211ENST00000536805 LCE1EQ5T753 118 aa2.53□□□□□ -2
PTCD2-211ENST00000536805 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
PTCD2-211ENST00000536805 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
PTCD2-211ENST00000536805 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
PTCD2-211ENST00000536805 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
PTCD2-211ENST00000536805 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
PTCD2-211ENST00000536805 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
PTCD2-211ENST00000536805 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
PTCD2-211ENST00000536805 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 98.4 ms