RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 SPINT4Q6UDR6 99 aa4.92□□□□□ -1.62
PRKDC-207ENST00000536483 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
PRKDC-207ENST00000536483 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
PRKDC-207ENST00000536483 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
PRKDC-207ENST00000536483 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
PRKDC-207ENST00000536483 GPR98Q8WXG9 6306 aa4.84□□□□□ -1.63
PRKDC-207ENST00000536483 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
PRKDC-207ENST00000536483 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
PRKDC-207ENST00000536483 CAMK2N1Q7Z7J9 78 aa4.8□□□□□ -1.64
PRKDC-207ENST00000536483 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
PRKDC-207ENST00000536483 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
PRKDC-207ENST00000536483 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
PRKDC-207ENST00000536483 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
PRKDC-207ENST00000536483 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
PRKDC-207ENST00000536483 MT1EP04732 61 aa4.63□□□□□ -1.67
PRKDC-207ENST00000536483 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
PRKDC-207ENST00000536483 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
PRKDC-207ENST00000536483 TNP1P09430 55 aa4.58□□□□□ -1.68
PRKDC-207ENST00000536483 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
PRKDC-207ENST00000536483 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
PRKDC-207ENST00000536483 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
PRKDC-207ENST00000536483 MT1GP13640 62 aa4.51□□□□□ -1.69
PRKDC-207ENST00000536483 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
PRKDC-207ENST00000536483 MT4P47944 62 aa4.48□□□□□ -1.69
PRKDC-207ENST00000536483 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
PRKDC-207ENST00000536483 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
PRKDC-207ENST00000536483 MT1LQ93083 61 aa4.43□□□□□ -1.7
PRKDC-207ENST00000536483 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
PRKDC-207ENST00000536483 MT1MQ8N339 61 aa4.4□□□□□ -1.71
PRKDC-207ENST00000536483 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
PRKDC-207ENST00000536483 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
PRKDC-207ENST00000536483 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
PRKDC-207ENST00000536483 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
PRKDC-207ENST00000536483 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
PRKDC-207ENST00000536483 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
PRKDC-207ENST00000536483 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
PRKDC-207ENST00000536483 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
PRKDC-207ENST00000536483 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
PRKDC-207ENST00000536483 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
PRKDC-207ENST00000536483 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
PRKDC-207ENST00000536483 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
PRKDC-207ENST00000536483 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
PRKDC-207ENST00000536483 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
PRKDC-207ENST00000536483 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
PRKDC-207ENST00000536483 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
PRKDC-207ENST00000536483 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
PRKDC-207ENST00000536483 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
PRKDC-207ENST00000536483 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
PRKDC-207ENST00000536483 MT1AP04731 61 aa3.78□□□□□ -1.8
PRKDC-207ENST00000536483 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
PRKDC-207ENST00000536483 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
PRKDC-207ENST00000536483 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
PRKDC-207ENST00000536483 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
PRKDC-207ENST00000536483 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
PRKDC-207ENST00000536483 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
PRKDC-207ENST00000536483 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
PRKDC-207ENST00000536483 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
PRKDC-207ENST00000536483 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
PRKDC-207ENST00000536483 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
PRKDC-207ENST00000536483 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
PRKDC-207ENST00000536483 INE1O15225 51 aa3.49□□□□□ -1.85
PRKDC-207ENST00000536483 MT3P25713 68 aa3.45□□□□□ -1.86
PRKDC-207ENST00000536483 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
PRKDC-207ENST00000536483 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
PRKDC-207ENST00000536483 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
PRKDC-207ENST00000536483 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
PRKDC-207ENST00000536483 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
PRKDC-207ENST00000536483 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
PRKDC-207ENST00000536483 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
PRKDC-207ENST00000536483 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
PRKDC-207ENST00000536483 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
PRKDC-207ENST00000536483 PHGR1C9JFL3 82 aa2.55□□□□□ -2
PRKDC-207ENST00000536483 PRM1P04553 51 aa2.55□□□□□ -2
PRKDC-207ENST00000536483 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
PRKDC-207ENST00000536483 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
PRKDC-207ENST00000536483 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
PRKDC-207ENST00000536483 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
PRKDC-207ENST00000536483 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms