RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 H0YAA0 97 aa2.06□□□□□ -2.08
CHD4-205ENST00000536301 MT4P47944 62 aa2.06□□□□□ -2.08
CHD4-205ENST00000536301 KRTAP10-12P60413 245 aa2.06□□□□□ -2.08
CHD4-205ENST00000536301 PLAC4Q8WY50 150 aa2.04□□□□□ -2.08
CHD4-205ENST00000536301 LCE5AQ5TCM9 118 aa2.03□□□□□ -2.08
CHD4-205ENST00000536301 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
CHD4-205ENST00000536301 P0C880 135 aa2.02□□□□□ -2.09
CHD4-205ENST00000536301 LCE4AQ5TA78 99 aa1.99□□□□□ -2.09
CHD4-205ENST00000536301 KRTAP4-6Q9BYQ5 205 aa1.99□□□□□ -2.09
CHD4-205ENST00000536301 SPRR5A0A1B0GTR4 108 aa1.98□□□□□ -2.09
CHD4-205ENST00000536301 NDUFAF8A1L188 74 aa1.98□□□□□ -2.09
CHD4-205ENST00000536301 KRTAP19-7Q3SYF9 63 aa1.98□□□□□ -2.09
CHD4-205ENST00000536301 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
CHD4-205ENST00000536301 KRTAP19-3Q7Z4W3 81 aa1.98□□□□□ -2.09
CHD4-205ENST00000536301 MT1EP04732 61 aa1.97□□□□□ -2.09
CHD4-205ENST00000536301 KRTAP15-1Q3LI76 137 aa1.97□□□□□ -2.09
CHD4-205ENST00000536301 A0A0A0MQY5 61 aa1.95□□□□□ -2.1
CHD4-205ENST00000536301 M0QZ58 72 aa1.94□□□□□ -2.1
CHD4-205ENST00000536301 KRTAP5-4Q6L8H1 288 aa1.94□□□□□ -2.1
CHD4-205ENST00000536301 R4GN34 69 aa1.94□□□□□ -2.1
CHD4-205ENST00000536301 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
CHD4-205ENST00000536301 A0A0D9SG42 100 aa1.92□□□□□ -2.1
CHD4-205ENST00000536301 LUZP6Q538Z0 58 aa1.92□□□□□ -2.1
CHD4-205ENST00000536301 KRTAP4-3Q9BYR4 195 aa1.91□□□□□ -2.1
CHD4-205ENST00000536301 KRTAP3-2Q9BYR7 98 aa1.91□□□□□ -2.1
CHD4-205ENST00000536301 SYNE1Q8NF91 8797 aaKnown RBP1.89□□□□□ -2.11
CHD4-205ENST00000536301 MT1MQ8N339 61 aa1.89□□□□□ -2.11
CHD4-205ENST00000536301 MT1GP13640 62 aa1.88□□□□□ -2.11
CHD4-205ENST00000536301 C10orf95Q9H7T3 257 aa1.88□□□□□ -2.11
CHD4-205ENST00000536301 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
CHD4-205ENST00000536301 KRTAP20-2Q3LI61 65 aa1.86□□□□□ -2.11
CHD4-205ENST00000536301 KRTAP13-4Q3LI77 160 aa1.86□□□□□ -2.11
CHD4-205ENST00000536301 PP632Q6XCG6 107 aa1.86□□□□□ -2.11
CHD4-205ENST00000536301 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
CHD4-205ENST00000536301 KRTAP19-5Q3LI72 72 aa1.85□□□□□ -2.11
CHD4-205ENST00000536301 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
CHD4-205ENST00000536301 CAMK2N1Q7Z7J9 78 aa1.83□□□□□ -2.12
CHD4-205ENST00000536301 MT1LQ93083 61 aa1.83□□□□□ -2.12
CHD4-205ENST00000536301 KRTAP4-7Q9BYR0 210 aa1.79□□□□□ -2.12
CHD4-205ENST00000536301 KRTAP23-1A1A580 65 aa1.77□□□□□ -2.13
CHD4-205ENST00000536301 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
CHD4-205ENST00000536301 KRTAP4-11Q9BYQ6 195 aa1.75□□□□□ -2.13
CHD4-205ENST00000536301 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
CHD4-205ENST00000536301 INE1O15225 51 aa1.71□□□□□ -2.14
CHD4-205ENST00000536301 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
CHD4-205ENST00000536301 LOC100996750A0A140TA64 210 aa1.7□□□□□ -2.14
CHD4-205ENST00000536301 TNP1P09430 55 aa1.7□□□□□ -2.14
CHD4-205ENST00000536301 OBSCNQ5VST9 7968 aa1.69□□□□□ -2.14
CHD4-205ENST00000536301 LCE3AQ5TA76 89 aa1.69□□□□□ -2.14
CHD4-205ENST00000536301 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
CHD4-205ENST00000536301 KRTAP9-9Q9BYP9 154 aa1.62□□□□□ -2.15
CHD4-205ENST00000536301 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
CHD4-205ENST00000536301 KRTAP6-1Q3LI64 71 aa1.58□□□□□ -2.16
CHD4-205ENST00000536301 MT1AP04731 61 aa1.54□□□□□ -2.16
CHD4-205ENST00000536301 KRTAP6-2Q3LI66 62 aa1.54□□□□□ -2.16
CHD4-205ENST00000536301 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
CHD4-205ENST00000536301 KRTAP9-4Q9BYQ2 154 aa1.51□□□□□ -2.17
CHD4-205ENST00000536301 KRTAP9-6A8MVA2 160 aa1.43□□□□□ -2.18
CHD4-205ENST00000536301 KRTAP19-4Q3LI73 84 aa1.43□□□□□ -2.18
CHD4-205ENST00000536301 LCE3CQ5T5A8 94 aa1.42□□□□□ -2.18
CHD4-205ENST00000536301 MT3P25713 68 aa1.39□□□□□ -2.19
CHD4-205ENST00000536301 KRTAP4-2Q9BYR5 136 aa1.35□□□□□ -2.19
CHD4-205ENST00000536301 KRTAP4-12Q9BQ66 201 aa1.34□□□□□ -2.19
CHD4-205ENST00000536301 LCE1EQ5T753 118 aa1.32□□□□□ -2.2
CHD4-205ENST00000536301 LCE1BQ5T7P3 118 aa1.32□□□□□ -2.2
CHD4-205ENST00000536301 LCE1CQ5T751 118 aa1.24□□□□□ -2.21
CHD4-205ENST00000536301 KRTAP5-11Q6L8G4 156 aa1.23□□□□□ -2.21
CHD4-205ENST00000536301 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
CHD4-205ENST00000536301 LCE1FQ5T754 118 aa1.15□□□□□ -2.23
CHD4-205ENST00000536301 LCE3EQ5T5B0 92 aa1.11□□□□□ -2.23
CHD4-205ENST00000536301 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.1□□□□□ -2.23
CHD4-205ENST00000536301 LCE3DQ9BYE3 92 aa1.1□□□□□ -2.23
CHD4-205ENST00000536301 MUC19Q7Z5P9 8384 aa1.08□□□□□ -2.24
CHD4-205ENST00000536301 PRM1P04553 51 aa1.07□□□□□ -2.24
CHD4-205ENST00000536301 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
CHD4-205ENST00000536301 KRTAP4-4Q9BYR3 166 aa1.03□□□□□ -2.24
CHD4-205ENST00000536301 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
CHD4-205ENST00000536301 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 74.7 ms