RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 KRTAP12-1P59990 96 aa1.88□□□□□ -2.11
GYPA-211ENST00000535709 WFDC13Q8IUB5 93 aa1.87□□□□□ -2.11
GYPA-211ENST00000535709 MUC2Q02817 5179 aa1.87□□□□□ -2.11
GYPA-211ENST00000535709 KRTAP19-2Q3LHN2 52 aa1.86□□□□□ -2.11
GYPA-211ENST00000535709 H0YAA0 97 aa1.84□□□□□ -2.11
GYPA-211ENST00000535709 KRTAP10-10P60014 251 aa1.84□□□□□ -2.11
GYPA-211ENST00000535709 FAT4Q6V0I7 4981 aa1.83□□□□□ -2.12
GYPA-211ENST00000535709 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
GYPA-211ENST00000535709 FLGP20930 4061 aaPredicted RBP1.81□□□□□ -2.12
GYPA-211ENST00000535709 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
GYPA-211ENST00000535709 C10orf95Q9H7T3 257 aa1.79□□□□□ -2.12
GYPA-211ENST00000535709 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
GYPA-211ENST00000535709 KRTAP12-4P60329 112 aa1.75□□□□□ -2.13
GYPA-211ENST00000535709 H1FX-AS1Q4G0G2 97 aa1.73□□□□□ -2.13
GYPA-211ENST00000535709 MT1HP80294 61 aa1.72□□□□□ -2.13
GYPA-211ENST00000535709 A0A0D9SG42 100 aa1.66□□□□□ -2.14
GYPA-211ENST00000535709 MT2AP02795 61 aa1.65□□□□□ -2.15
GYPA-211ENST00000535709 MT1FP04733 61 aa1.65□□□□□ -2.15
GYPA-211ENST00000535709 S4R3F8 94 aa1.63□□□□□ -2.15
GYPA-211ENST00000535709 USH2AO75445 5202 aa1.61□□□□□ -2.15
GYPA-211ENST00000535709 SSPOA2VEC9 5147 aa1.58□□□□□ -2.16
GYPA-211ENST00000535709 M0R2T5 61 aa1.58□□□□□ -2.16
GYPA-211ENST00000535709 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
GYPA-211ENST00000535709 MT1BP07438 61 aa1.56□□□□□ -2.16
GYPA-211ENST00000535709 SPRR2GQ9BYE4 73 aa1.55□□□□□ -2.16
GYPA-211ENST00000535709 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
GYPA-211ENST00000535709 KRTAP19-8Q3LI54 63 aa1.54□□□□□ -2.16
GYPA-211ENST00000535709 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
GYPA-211ENST00000535709 FSIP2Q5CZC0 6907 aa1.51□□□□□ -2.17
GYPA-211ENST00000535709 M0QZ58 72 aa1.5□□□□□ -2.17
GYPA-211ENST00000535709 KRTAP12-3P60328 96 aa1.5□□□□□ -2.17
GYPA-211ENST00000535709 MT1XP80297 61 aa1.49□□□□□ -2.17
GYPA-211ENST00000535709 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
GYPA-211ENST00000535709 FCGBPQ9Y6R7 5405 aaPredicted RBP1.47□□□□□ -2.17
GYPA-211ENST00000535709 CRCT1Q9UGL9 99 aa1.44□□□□□ -2.18
GYPA-211ENST00000535709 KMT2DO14686 5537 aa1.44□□□□□ -2.18
GYPA-211ENST00000535709 MACF1Q9UPN3 7388 aaKnown RBP1.39□□□□□ -2.19
GYPA-211ENST00000535709 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
GYPA-211ENST00000535709 SYNE2Q8WXH0 6885 aaKnown RBP1.34□□□□□ -2.19
GYPA-211ENST00000535709 KRTAP19-7Q3SYF9 63 aa1.34□□□□□ -2.19
GYPA-211ENST00000535709 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
GYPA-211ENST00000535709 KRTAP19-5Q3LI72 72 aa1.31□□□□□ -2.2
GYPA-211ENST00000535709 KRTAP8-1Q8IUC2 63 aa1.3□□□□□ -2.2
GYPA-211ENST00000535709 MT1EP04732 61 aa1.29□□□□□ -2.2
GYPA-211ENST00000535709 TNP1P09430 55 aa1.29□□□□□ -2.2
GYPA-211ENST00000535709 MT1LQ93083 61 aa1.26□□□□□ -2.21
GYPA-211ENST00000535709 SPRR2FQ96RM1 72 aa1.26□□□□□ -2.21
GYPA-211ENST00000535709 NEBP20929 6669 aa1.25□□□□□ -2.21
GYPA-211ENST00000535709 MDN1Q9NU22 5596 aa1.24□□□□□ -2.21
GYPA-211ENST00000535709 KRTAP19-3Q7Z4W3 81 aa1.23□□□□□ -2.21
GYPA-211ENST00000535709 KRTAP2-3P0C7H8 128 aa1.22□□□□□ -2.21
GYPA-211ENST00000535709 MT1MQ8N339 61 aa1.22□□□□□ -2.21
GYPA-211ENST00000535709 KRTAP2-4Q9BYR9 128 aa1.22□□□□□ -2.21
GYPA-211ENST00000535709 KRTAP2-1Q9BYU5 128 aa1.22□□□□□ -2.21
GYPA-211ENST00000535709 SPRR2EP22531 72 aa1.21□□□□□ -2.22
GYPA-211ENST00000535709 SPRR2BP35325 72 aa1.21□□□□□ -2.22
GYPA-211ENST00000535709 SPRR2AP35326 72 aa1.21□□□□□ -2.22
GYPA-211ENST00000535709 MT1GP13640 62 aa1.2□□□□□ -2.22
GYPA-211ENST00000535709 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
GYPA-211ENST00000535709 SPRR2DP22532 72 aa1.15□□□□□ -2.23
GYPA-211ENST00000535709 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
GYPA-211ENST00000535709 KRTAP20-1Q3LI63 56 aa1.1□□□□□ -2.23
GYPA-211ENST00000535709 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
GYPA-211ENST00000535709 PRM1P04553 51 aa1.07□□□□□ -2.24
GYPA-211ENST00000535709 MT1AP04731 61 aa1.06□□□□□ -2.24
GYPA-211ENST00000535709 MT4P47944 62 aa1.03□□□□□ -2.24
GYPA-211ENST00000535709 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
GYPA-211ENST00000535709 KRTAP6-2Q3LI66 62 aa0.99□□□□□ -2.25
GYPA-211ENST00000535709 AHNAK2Q8IVF2 5795 aa0.95□□□□□ -2.26
GYPA-211ENST00000535709 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
GYPA-211ENST00000535709 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
GYPA-211ENST00000535709 GPR98Q8WXG9 6306 aa0.89□□□□□ -2.27
GYPA-211ENST00000535709 MUC5ACP98088 5654 aa0.84□□□□□ -2.28
GYPA-211ENST00000535709 MUC5BQ9HC84 5762 aaPredicted RBP0.74□□□□□ -2.29
GYPA-211ENST00000535709 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
GYPA-211ENST00000535709 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
GYPA-211ENST00000535709 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms