RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 LCE2AQ5TA79 106 aaPredicted RBP3.34□□□□□ -1.88
NCAPD3-214ENST00000534548 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
NCAPD3-214ENST00000534548 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
NCAPD3-214ENST00000534548 MT1LQ93083 61 aa3.29□□□□□ -1.88
NCAPD3-214ENST00000534548 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
NCAPD3-214ENST00000534548 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.89
NCAPD3-214ENST00000534548 KRTAP2-3P0C7H8 128 aa3.27□□□□□ -1.89
NCAPD3-214ENST00000534548 KRTAP2-4Q9BYR9 128 aa3.27□□□□□ -1.89
NCAPD3-214ENST00000534548 KRTAP2-1Q9BYU5 128 aa3.27□□□□□ -1.89
NCAPD3-214ENST00000534548 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
NCAPD3-214ENST00000534548 MT1EP04732 61 aa3.24□□□□□ -1.89
NCAPD3-214ENST00000534548 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
NCAPD3-214ENST00000534548 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
NCAPD3-214ENST00000534548 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
NCAPD3-214ENST00000534548 LOC100996750A0A140TA64 210 aa3.21□□□□□ -1.9
NCAPD3-214ENST00000534548 PRM1P04553 51 aa3.2□□□□□ -1.9
NCAPD3-214ENST00000534548 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
NCAPD3-214ENST00000534548 LCE2DQ5TA82 110 aaPredicted RBP3.15□□□□□ -1.9
NCAPD3-214ENST00000534548 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
NCAPD3-214ENST00000534548 KRTAP9-6A0A140TA67 174 aa3.11□□□□□ -1.91
NCAPD3-214ENST00000534548 KRTAP9-2Q9BYQ4 174 aa3.1□□□□□ -1.91
NCAPD3-214ENST00000534548 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
NCAPD3-214ENST00000534548 MT1MQ8N339 61 aa3.08□□□□□ -1.92
NCAPD3-214ENST00000534548 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
NCAPD3-214ENST00000534548 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
NCAPD3-214ENST00000534548 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
NCAPD3-214ENST00000534548 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
NCAPD3-214ENST00000534548 MT3P25713 68 aa2.97□□□□□ -1.93
NCAPD3-214ENST00000534548 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
NCAPD3-214ENST00000534548 KRTAP9-7A8MTY7 169 aa2.9□□□□□ -1.95
NCAPD3-214ENST00000534548 MT4P47944 62 aa2.9□□□□□ -1.95
NCAPD3-214ENST00000534548 MT1AP04731 61 aa2.89□□□□□ -1.95
NCAPD3-214ENST00000534548 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
NCAPD3-214ENST00000534548 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
NCAPD3-214ENST00000534548 KRTAP6-3Q3LI67 103 aa2.85□□□□□ -1.95
NCAPD3-214ENST00000534548 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.96
NCAPD3-214ENST00000534548 LCE1AQ5T7P2 110 aa2.83□□□□□ -1.96
NCAPD3-214ENST00000534548 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
NCAPD3-214ENST00000534548 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
NCAPD3-214ENST00000534548 LCE1DQ5T752 114 aa2.75□□□□□ -1.97
NCAPD3-214ENST00000534548 KRTAP2-2Q9BYT5 123 aa2.75□□□□□ -1.97
NCAPD3-214ENST00000534548 LCE4AQ5TA78 99 aa2.74□□□□□ -1.97
NCAPD3-214ENST00000534548 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.68□□□□□ -1.98
NCAPD3-214ENST00000534548 KRTAP9-4Q9BYQ2 154 aa2.64□□□□□ -1.99
NCAPD3-214ENST00000534548 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
NCAPD3-214ENST00000534548 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
NCAPD3-214ENST00000534548 KRTAP5-9P26371 169 aa2.53□□□□□ -2
NCAPD3-214ENST00000534548 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
NCAPD3-214ENST00000534548 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
NCAPD3-214ENST00000534548 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
NCAPD3-214ENST00000534548 KRTAP9-9Q9BYP9 154 aa2.47□□□□□ -2.01
NCAPD3-214ENST00000534548 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
NCAPD3-214ENST00000534548 KRTAP4-6Q9BYQ5 205 aa2.32□□□□□ -2.04
NCAPD3-214ENST00000534548 NEBP20929 6669 aa2.3□□□□□ -2.04
NCAPD3-214ENST00000534548 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
NCAPD3-214ENST00000534548 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
NCAPD3-214ENST00000534548 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
NCAPD3-214ENST00000534548 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
NCAPD3-214ENST00000534548 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
NCAPD3-214ENST00000534548 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
NCAPD3-214ENST00000534548 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
NCAPD3-214ENST00000534548 KRTAP5-3Q6L8H2 238 aa1.97□□□□□ -2.09
NCAPD3-214ENST00000534548 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
NCAPD3-214ENST00000534548 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
NCAPD3-214ENST00000534548 KRTAP4-2Q9BYR5 136 aa1.85□□□□□ -2.11
NCAPD3-214ENST00000534548 KRTAP4-12Q9BQ66 201 aa1.82□□□□□ -2.12
NCAPD3-214ENST00000534548 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
NCAPD3-214ENST00000534548 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
NCAPD3-214ENST00000534548 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
NCAPD3-214ENST00000534548 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
NCAPD3-214ENST00000534548 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
NCAPD3-214ENST00000534548 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
NCAPD3-214ENST00000534548 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
NCAPD3-214ENST00000534548 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
NCAPD3-214ENST00000534548 KRTAP5-11Q6L8G4 156 aa1.52□□□□□ -2.17
NCAPD3-214ENST00000534548 KRTAP5-7Q6L8G8 165 aa1.49□□□□□ -2.17
NCAPD3-214ENST00000534548 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms