RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 KRTAP8-1Q8IUC2 63 aa1.21□□□□□ -2.22
CSDE1-216ENST00000534389 LRP2P98164 4655 aa1.21□□□□□ -2.22
CSDE1-216ENST00000534389 MUC17Q685J3 4493 aa1.21□□□□□ -2.22
CSDE1-216ENST00000534389 KRTAP12-3P60328 96 aa1.2□□□□□ -2.22
CSDE1-216ENST00000534389 KMT2CQ8NEZ4 4911 aaKnown RBP1.18□□□□□ -2.22
CSDE1-216ENST00000534389 RYR2Q92736 4967 aa1.16□□□□□ -2.22
CSDE1-216ENST00000534389 KRTAP2-3P0C7H8 128 aa1.16□□□□□ -2.22
CSDE1-216ENST00000534389 KRTAP2-4Q9BYR9 128 aa1.16□□□□□ -2.22
CSDE1-216ENST00000534389 KRTAP2-1Q9BYU5 128 aa1.16□□□□□ -2.22
CSDE1-216ENST00000534389 SPRR2GQ9BYE4 73 aa1.14□□□□□ -2.23
CSDE1-216ENST00000534389 RYR1P21817 5038 aa1.14□□□□□ -2.23
CSDE1-216ENST00000534389 MT1XP80297 61 aa1.12□□□□□ -2.23
CSDE1-216ENST00000534389 MT1BP07438 61 aa1.1□□□□□ -2.23
CSDE1-216ENST00000534389 KRTAP12-4P60329 112 aa1.1□□□□□ -2.23
CSDE1-216ENST00000534389 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
CSDE1-216ENST00000534389 KRTAP19-8Q3LI54 63 aa1.09□□□□□ -2.23
CSDE1-216ENST00000534389 KRTAP19-5Q3LI72 72 aa1.09□□□□□ -2.23
CSDE1-216ENST00000534389 MUC19Q7Z5P9 8384 aa1.08□□□□□ -2.24
CSDE1-216ENST00000534389 MT1FP04733 61 aa1.07□□□□□ -2.24
CSDE1-216ENST00000534389 HERC2O95714 4834 aa1.06□□□□□ -2.24
CSDE1-216ENST00000534389 RYR3Q15413 4870 aa1.06□□□□□ -2.24
CSDE1-216ENST00000534389 KIAA1109Q2LD37 5005 aa1.06□□□□□ -2.24
CSDE1-216ENST00000534389 MT2AP02795 61 aa1.06□□□□□ -2.24
CSDE1-216ENST00000534389 KRTAP6-3Q3LI67 103 aa1.06□□□□□ -2.24
CSDE1-216ENST00000534389 MUC2Q02817 5179 aa1.05□□□□□ -2.24
CSDE1-216ENST00000534389 BIRC6Q9NR09 4857 aa1.05□□□□□ -2.24
CSDE1-216ENST00000534389 ABCA13Q86UQ4 5058 aa1.05□□□□□ -2.24
CSDE1-216ENST00000534389 HMCN2Q8NDA2 5059 aa1.02□□□□□ -2.25
CSDE1-216ENST00000534389 PCLOQ9Y6V0 5065 aa1.02□□□□□ -2.25
CSDE1-216ENST00000534389 M0R2T5 61 aa1.01□□□□□ -2.25
CSDE1-216ENST00000534389 UBR4Q5T4S7 5183 aa1□□□□□ -2.25
CSDE1-216ENST00000534389 MT1HP80294 61 aa1□□□□□ -2.25
CSDE1-216ENST00000534389 KRTAP19-7Q3SYF9 63 aa1□□□□□ -2.25
CSDE1-216ENST00000534389 EPPK1P58107 5090 aaKnown RBP0.98□□□□□ -2.25
CSDE1-216ENST00000534389 KRTAP21-3Q3LHN1 58 aa0.98□□□□□ -2.25
CSDE1-216ENST00000534389 MT1LQ93083 61 aa0.98□□□□□ -2.25
CSDE1-216ENST00000534389 PRM1P04553 51 aa0.94□□□□□ -2.26
CSDE1-216ENST00000534389 MT1EP04732 61 aa0.94□□□□□ -2.26
CSDE1-216ENST00000534389 KRTAP21-2Q3LI59 83 aa0.93□□□□□ -2.26
CSDE1-216ENST00000534389 RNF213Q63HN8 5207 aa0.92□□□□□ -2.26
CSDE1-216ENST00000534389 MT1GP13640 62 aa0.92□□□□□ -2.26
CSDE1-216ENST00000534389 FAT4Q6V0I7 4981 aa0.91□□□□□ -2.26
CSDE1-216ENST00000534389 KMT2DO14686 5537 aa0.9□□□□□ -2.27
CSDE1-216ENST00000534389 SYNE1Q8NF91 8797 aaKnown RBP0.89□□□□□ -2.27
CSDE1-216ENST00000534389 MT1AP04731 61 aa0.89□□□□□ -2.27
CSDE1-216ENST00000534389 KRTAP6-2Q3LI66 62 aa0.87□□□□□ -2.27
CSDE1-216ENST00000534389 MT1MQ8N339 61 aa0.87□□□□□ -2.27
CSDE1-216ENST00000534389 CRCT1Q9UGL9 99 aa0.87□□□□□ -2.27
CSDE1-216ENST00000534389 KRTAP6-1Q3LI64 71 aa0.84□□□□□ -2.27
CSDE1-216ENST00000534389 USH2AO75445 5202 aa0.84□□□□□ -2.28
CSDE1-216ENST00000534389 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
CSDE1-216ENST00000534389 KRTAP19-3Q7Z4W3 81 aa0.81□□□□□ -2.28
CSDE1-216ENST00000534389 SPRR2FQ96RM1 72 aa0.81□□□□□ -2.28
CSDE1-216ENST00000534389 FCGBPQ9Y6R7 5405 aaPredicted RBP0.81□□□□□ -2.28
CSDE1-216ENST00000534389 SSPOA2VEC9 5147 aa0.8□□□□□ -2.28
CSDE1-216ENST00000534389 AHNAKQ09666 5890 aaKnown RBP0.76□□□□□ -2.29
CSDE1-216ENST00000534389 MUC12Q9UKN1 5478 aa0.75□□□□□ -2.29
CSDE1-216ENST00000534389 SPRR2EP22531 72 aa0.72□□□□□ -2.29
CSDE1-216ENST00000534389 KRTAP19-6Q3LI70 58 aa0.72□□□□□ -2.29
CSDE1-216ENST00000534389 SPRR2AP35326 72 aa0.71□□□□□ -2.3
CSDE1-216ENST00000534389 MDN1Q9NU22 5596 aa0.7□□□□□ -2.3
CSDE1-216ENST00000534389 SPRR2DP22532 72 aa0.69□□□□□ -2.3
CSDE1-216ENST00000534389 SPRR2BP35325 72 aa0.69□□□□□ -2.3
CSDE1-216ENST00000534389 MUC5BQ9HC84 5762 aaPredicted RBP0.68□□□□□ -2.3
CSDE1-216ENST00000534389 MUC5ACP98088 5654 aa0.66□□□□□ -2.3
CSDE1-216ENST00000534389 KRTAP5-10Q6L8G5 202 aa0.64□□□□□ -2.31
CSDE1-216ENST00000534389 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
CSDE1-216ENST00000534389 DSTQ03001 7570 aaKnown RBP0.63□□□□□ -2.31
CSDE1-216ENST00000534389 SYNE2Q8WXH0 6885 aaKnown RBP0.61□□□□□ -2.31
CSDE1-216ENST00000534389 FSIP2Q5CZC0 6907 aa0.6□□□□□ -2.31
CSDE1-216ENST00000534389 GPR98Q8WXG9 6306 aa0.54□□□□□ -2.32
CSDE1-216ENST00000534389 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
CSDE1-216ENST00000534389 KRTAP20-2Q3LI61 65 aa0.51□□□□□ -2.33
CSDE1-216ENST00000534389 MACF1Q9UPN3 7388 aaKnown RBP0.49□□□□□ -2.33
CSDE1-216ENST00000534389 MT4P47944 62 aa0.47□□□□□ -2.33
CSDE1-216ENST00000534389 NEBP20929 6669 aa0.47□□□□□ -2.33
CSDE1-216ENST00000534389 KRTAP20-1Q3LI63 56 aa0.4□□□□□ -2.35
CSDE1-216ENST00000534389 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 122.2 ms