RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 A0A1B0GU69 56 aa3.43□□□□□ -1.86
SSBP3-215ENST00000533946 ANAPC13Q9BS18 74 aa3.43□□□□□ -1.86
SSBP3-215ENST00000533946 MT1GP13640 62 aa3.41□□□□□ -1.86
SSBP3-215ENST00000533946 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
SSBP3-215ENST00000533946 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
SSBP3-215ENST00000533946 SMIM26A0A096LP01 95 aa3.36□□□□□ -1.87
SSBP3-215ENST00000533946 MT4P47944 62 aa3.35□□□□□ -1.87
SSBP3-215ENST00000533946 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
SSBP3-215ENST00000533946 LINC01558Q9Y6Z2 57 aa3.31□□□□□ -1.88
SSBP3-215ENST00000533946 TNP1P09430 55 aa3.3□□□□□ -1.88
SSBP3-215ENST00000533946 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
SSBP3-215ENST00000533946 PP632Q6XCG6 107 aa3.29□□□□□ -1.88
SSBP3-215ENST00000533946 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
SSBP3-215ENST00000533946 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
SSBP3-215ENST00000533946 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
SSBP3-215ENST00000533946 ATP5EP56381 51 aaPredicted RBP3.22□□□□□ -1.89
SSBP3-215ENST00000533946 PRR15LQ9BU68 103 aa3.22□□□□□ -1.89
SSBP3-215ENST00000533946 TMEM258P61165 79 aa3.18□□□□□ -1.9
SSBP3-215ENST00000533946 UQCR11O14957 56 aa3.17□□□□□ -1.9
SSBP3-215ENST00000533946 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
SSBP3-215ENST00000533946 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
SSBP3-215ENST00000533946 PSPHP1O15172 72 aa3.14□□□□□ -1.91
SSBP3-215ENST00000533946 MIR22HGQ0VDD5 57 aa3.14□□□□□ -1.91
SSBP3-215ENST00000533946 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
SSBP3-215ENST00000533946 KRTAP25-1Q3LHN0 102 aa3.08□□□□□ -1.92
SSBP3-215ENST00000533946 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
SSBP3-215ENST00000533946 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
SSBP3-215ENST00000533946 Q1T7F1 81 aa3.04□□□□□ -1.92
SSBP3-215ENST00000533946 KRTAP15-1Q3LI76 137 aa3.01□□□□□ -1.93
SSBP3-215ENST00000533946 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
SSBP3-215ENST00000533946 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
SSBP3-215ENST00000533946 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
SSBP3-215ENST00000533946 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
SSBP3-215ENST00000533946 KRTAP12-4P60329 112 aa2.96□□□□□ -1.94
SSBP3-215ENST00000533946 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.94
SSBP3-215ENST00000533946 A6NED7 52 aa2.94□□□□□ -1.94
SSBP3-215ENST00000533946 K7ERS5 55 aa2.94□□□□□ -1.94
SSBP3-215ENST00000533946 V9GYY9 64 aa2.93□□□□□ -1.94
SSBP3-215ENST00000533946 KRTAP23-1A1A580 65 aa2.92□□□□□ -1.94
SSBP3-215ENST00000533946 MT1AP04731 61 aa2.88□□□□□ -1.95
SSBP3-215ENST00000533946 ROMO1P60602 79 aa2.87□□□□□ -1.95
SSBP3-215ENST00000533946 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
SSBP3-215ENST00000533946 CDC42SE1Q9NRR8 79 aa2.86□□□□□ -1.95
SSBP3-215ENST00000533946 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
SSBP3-215ENST00000533946 RPS28P62857 69 aaKnown RBP2.79□□□□□ -1.96
SSBP3-215ENST00000533946 PCP4P48539 62 aa2.78□□□□□ -1.96
SSBP3-215ENST00000533946 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
SSBP3-215ENST00000533946 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
SSBP3-215ENST00000533946 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
SSBP3-215ENST00000533946 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
SSBP3-215ENST00000533946 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
SSBP3-215ENST00000533946 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
SSBP3-215ENST00000533946 MT3P25713 68 aa2.59□□□□□ -1.99
SSBP3-215ENST00000533946 BRK1Q8WUW1 75 aa2.48□□□□□ -2.01
SSBP3-215ENST00000533946 SVIPQ8NHG7 77 aa2.45□□□□□ -2.02
SSBP3-215ENST00000533946 PRAC1Q96KF2 57 aa2.39□□□□□ -2.03
SSBP3-215ENST00000533946 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
SSBP3-215ENST00000533946 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
SSBP3-215ENST00000533946 PMAIP1Q13794 54 aa2.29□□□□□ -2.04
SSBP3-215ENST00000533946 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
SSBP3-215ENST00000533946 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
SSBP3-215ENST00000533946 A0A0A0MQY5 61 aa2.21□□□□□ -2.06
SSBP3-215ENST00000533946 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
SSBP3-215ENST00000533946 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
SSBP3-215ENST00000533946 PRO0628Q9UI54 55 aa2.03□□□□□ -2.08
SSBP3-215ENST00000533946 LCE3EQ5T5B0 92 aa1.98□□□□□ -2.09
SSBP3-215ENST00000533946 KTN1-AS1Q86SY8 53 aa1.97□□□□□ -2.09
SSBP3-215ENST00000533946 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
SSBP3-215ENST00000533946 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
SSBP3-215ENST00000533946 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
SSBP3-215ENST00000533946 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
SSBP3-215ENST00000533946 LUZP6Q538Z0 58 aa1.77□□□□□ -2.13
SSBP3-215ENST00000533946 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
SSBP3-215ENST00000533946 NDUFAF8A1L188 74 aa1.69□□□□□ -2.14
SSBP3-215ENST00000533946 PRM1P04553 51 aa1.53□□□□□ -2.16
SSBP3-215ENST00000533946 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
SSBP3-215ENST00000533946 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
SSBP3-215ENST00000533946 INE1O15225 51 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 78.5 ms